RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 SAGE1Q9NXZ1 904 aa21.41■■□□□ 1.02
LMO2-203ENST00000411482 ADAMTS5Q9UNA0 930 aa21.41■■□□□ 1.02
LMO2-203ENST00000411482 ZSCAN12O43309 604 aa21.4■■□□□ 1.02
LMO2-203ENST00000411482 EYA4O95677 639 aa21.4■■□□□ 1.02
LMO2-203ENST00000411482 GADL1Q6ZQY3 521 aa21.4■■□□□ 1.02
LMO2-203ENST00000411482 WDR11Q9BZH6 1224 aa21.4■■□□□ 1.02
LMO2-203ENST00000411482 PARP14Q460N5 1801 aa21.4■■□□□ 1.02
LMO2-203ENST00000411482 UQCRHLA0A096LP55 91 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 UQCRHP07919 91 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 TPM1P09493 284 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 CASP14P31944 242 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 FXR1P51114 621 aaKnown RBP eCLIP21.39■■□□□ 1.02
LMO2-203ENST00000411482 PSMC6P62333 389 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 UBXN1Q04323 297 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 GIT2Q14161 759 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 MIIPQ5JXC2 388 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 LRCH2Q5VUJ6 765 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 LRRC55Q6ZSA7 311 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 ZC3H3Q8IXZ2 948 aaKnown RBP21.39■■□□□ 1.02
LMO2-203ENST00000411482 CNOT6LQ96LI5 555 aaKnown RBP21.39■■□□□ 1.02
LMO2-203ENST00000411482 UIMC1Q96RL1 719 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 ERGIC2Q96RQ1 377 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 RPAP3Q9H6T3 665 aaPredicted RBP21.39■■□□□ 1.02
LMO2-203ENST00000411482 ZCCHC17Q9NP64 241 aaKnown RBP21.39■■□□□ 1.02
LMO2-203ENST00000411482 COL20A1Q9P218 1284 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 TSKSQ9UJT2 592 aa21.39■■□□□ 1.02
LMO2-203ENST00000411482 GOLGA6L9A6NEM1 432 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 PDHXO00330 501 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 NFIBO00712 420 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 DYNC1I1O14576 645 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 CA12O43570 354 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 ZBED4O75132 1171 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 FLOT1O75955 427 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 KIF20AO95235 890 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 TBC1D8O95759 1140 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 ALDH1A1P00352 501 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 RETREG2Q8NC44 543 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 BEGAINQ9BUH8 593 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 AGTPBP1Q9UPW5 1226 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 UBIAD1Q9Y5Z9 338 aa21.39■■□□□ 1.01
LMO2-203ENST00000411482 CASP8AP2Q9UKL3 1982 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 RLFQ13129 1914 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 VWA5AO00534 786 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 SLITRK3O94933 977 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 OAZ1P54368 228 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 EPHA7Q15375 998 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 FIGNQ5HY92 759 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 PCNX4Q63HM2 1172 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 REPS2Q8NFH8 660 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 SYTL5Q8TDW5 730 aaPredicted RBP21.38■■□□□ 1.01
LMO2-203ENST00000411482 IQCDQ96DY2 449 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 TANGO6Q9C0B7 1094 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 PPP2R2CQ9Y2T4 447 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 SLC45A1Q9Y2W3 748 aa21.38■■□□□ 1.01
LMO2-203ENST00000411482 SSBP05455 408 aaKnown RBP eCLIP21.37■■□□□ 1.01
LMO2-203ENST00000411482 ARP10275 920 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 HSPA8P11142 646 aaKnown RBP21.37■■□□□ 1.01
LMO2-203ENST00000411482 ITGB5P18084 799 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 CRHR2Q13324 411 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 TMTC1Q8IUR5 882 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 GLIS3Q8NEA6 775 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 CEP63Q96MT8 703 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 TSG101Q99816 390 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 NUP58Q9BVL2 599 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 RAVER2Q9HCJ3 691 aaKnown RBP21.37■■□□□ 1.01
LMO2-203ENST00000411482 CAPN11Q9UMQ6 739 aa21.37■■□□□ 1.01
LMO2-203ENST00000411482 RNF225M0QZC1 329 aaPredicted RBP21.36■■□□□ 1.01
LMO2-203ENST00000411482 RIOK3O14730 519 aaKnown RBP21.36■■□□□ 1.01
LMO2-203ENST00000411482 ATP2A1O14983 1001 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 GAS7O60861 476 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 HERC4Q5GLZ8 1057 aaPredicted RBP21.36■■□□□ 1.01
LMO2-203ENST00000411482 MUM1L1Q5H9M0 696 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 TRIM65Q6PJ69 517 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 EPM2AIP1Q7L775 607 aaPredicted RBP21.36■■□□□ 1.01
LMO2-203ENST00000411482 NEK9Q8TD19 979 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 DNAJC7Q99615 494 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 ZNF577Q9BSK1 485 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 TTYH3Q9C0H2 523 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 KCTD10Q9H3F6 313 aa21.36■■□□□ 1.01
LMO2-203ENST00000411482 RBBP6Q7Z6E9 1792 aaKnown RBP21.36■■□□□ 1.01
LMO2-203ENST00000411482 NPHP3-ACAD11A0A0J9YXS1 232 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 CTIFO43310 598 aaKnown RBP21.35■■□□□ 1.01
LMO2-203ENST00000411482 ALAS1P13196 640 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 DSG3P32926 999 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 MARSP56192 900 aaKnown RBP21.35■■□□□ 1.01
LMO2-203ENST00000411482 ETF1P62495 437 aaKnown RBP21.35■■□□□ 1.01
LMO2-203ENST00000411482 FKBP3Q00688 224 aaKnown RBP21.35■■□□□ 1.01
LMO2-203ENST00000411482 PABPC4Q13310 644 aaKnown RBP eCLIP21.35■■□□□ 1.013e-6■□□□□ 10.2
LMO2-203ENST00000411482 LRRC41Q15345 812 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 TAF1CQ15572 869 aaPredicted RBP21.35■■□□□ 1.01
LMO2-203ENST00000411482 XRRA1Q6P2D8 792 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 PPP4R3CPQ6ZMV5 832 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 KIF18AQ8NI77 898 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 SCFD1Q8WVM8 642 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 TEKT3Q9BXF9 490 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 ABHD10Q9NUJ1 306 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 RGL1Q9NZL6 768 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 TMOD4Q9NZQ9 345 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 ADGRA2Q96PE1 1338 aa21.35■■□□□ 1.01
LMO2-203ENST00000411482 IPO5O00410 1097 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms