RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 PLEKHA8P1O95397 391 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 LINC00271P0C7V0 271 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 LTBRP36941 435 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 IGBP1P78318 339 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 HYAL1Q12794 435 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 CTC1Q2NKJ3 1217 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 MARCH8Q5T0T0 291 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 IER5Q5VY09 327 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 POTEBQ6S5H4 581 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 TNPO1Q92973 898 aaKnown RBP19.17■□□□□ 0.66
MRPL55-220ENST00000411464 PLVAPQ9BX97 442 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 RBM8AQ9Y5S9 174 aaKnown RBP19.17■□□□□ 0.66
MRPL55-220ENST00000411464 UBIAD1Q9Y5Z9 338 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 RRN3P2A6NIE6 340 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 C19orf67A6NJJ6 358 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 DGKIO75912 1065 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 CALM1P0DP23 149 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 CALM2P0DP24 149 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 CALM3P0DP25 149 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 MCM5P33992 734 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 MRPS6P82932 125 aaKnown RBP19.16■□□□□ 0.66
MRPL55-220ENST00000411464 CLUL1Q15846 466 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 CMTR1Q8N1G2 835 aaKnown RBP19.16■□□□□ 0.66
MRPL55-220ENST00000411464 ZNF689Q96CS4 500 aaPredicted RBP19.16■□□□□ 0.66
MRPL55-220ENST00000411464 POP1Q99575 1024 aaKnown RBP19.16■□□□□ 0.66
MRPL55-220ENST00000411464 FAM49AQ9H0Q0 323 aaPredicted RBP19.16■□□□□ 0.66
MRPL55-220ENST00000411464 IGFLR1Q9H665 355 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 AZI2Q9H6S1 392 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 RC3H2Q9HBD1 1191 aaKnown RBP19.16■□□□□ 0.66
MRPL55-220ENST00000411464 JADE2Q9NQC1 790 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 MICAL3Q7RTP6 2002 aa19.16■□□□□ 0.66
MRPL55-220ENST00000411464 M0QZ92 97 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 CSPG5O95196 566 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 INSRRP14616 1297 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 UBE2SQ16763 222 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 PPP2R3CQ969Q6 453 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 TMEM87BQ96K49 555 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 FTHL17Q9BXU8 183 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 AGO3Q9H9G7 860 aaKnown RBP19.15■□□□□ 0.66
MRPL55-220ENST00000411464 ALG13Q9NP73 1137 aaKnown RBP19.15■□□□□ 0.66
MRPL55-220ENST00000411464 PCDHA6Q9UN73 950 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 PLAGL2Q9UPG8 496 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 PCDHA8Q9Y5H6 950 aa19.15■□□□□ 0.66
MRPL55-220ENST00000411464 BAZ2BQ9UIF8 2168 aaKnown RBP19.15■□□□□ 0.66
MRPL55-220ENST00000411464 SH2B2O14492 632 aaPredicted RBP19.14■□□□□ 0.65
MRPL55-220ENST00000411464 MMP1P03956 469 aa19.14■□□□□ 0.65
MRPL55-220ENST00000411464 CD52P31358 61 aa19.14■□□□□ 0.65
MRPL55-220ENST00000411464 DLX2Q07687 328 aaPredicted RBP19.14■□□□□ 0.65
MRPL55-220ENST00000411464 SMAD2Q15796 467 aaKnown RBP19.14■□□□□ 0.65
MRPL55-220ENST00000411464 CCDC82Q8N4S0 544 aa19.14■□□□□ 0.65
MRPL55-220ENST00000411464 JPH1Q9HDC5 661 aaPredicted RBP19.14■□□□□ 0.65
MRPL55-220ENST00000411464 SLC9A2Q9UBY0 812 aa19.14■□□□□ 0.65
MRPL55-220ENST00000411464 TRPC6Q9Y210 931 aa19.14■□□□□ 0.65
MRPL55-220ENST00000411464 SLC12A7Q9Y666 1083 aa19.14■□□□□ 0.65
MRPL55-220ENST00000411464 SQORQ9Y6N5 450 aa19.14■□□□□ 0.65
MRPL55-220ENST00000411464 hCG_1642624A0A1W2PR95 340 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 MBTPS2O43462 519 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 STAG3L1P0CL83 205 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 RXRAP19793 462 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 IRS1P35568 1242 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 LIFRP42702 1097 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 NAALADL2Q58DX5 795 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 HEATR3Q7Z4Q2 680 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 ALYREFQ86V81 257 aaKnown RBP19.13■□□□□ 0.65
MRPL55-220ENST00000411464 CMTR2Q8IYT2 770 aaKnown RBP19.13■□□□□ 0.65
MRPL55-220ENST00000411464 P2RX5Q93086 422 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 ZBTB10Q96DT7 871 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 CD207Q9UJ71 328 aa19.13■□□□□ 0.65
MRPL55-220ENST00000411464 GTF2F1P35269 517 aaKnown RBP eCLIP19.12■□□□□ 0.65
MRPL55-220ENST00000411464 PAK2Q13177 524 aa19.12■□□□□ 0.65
MRPL55-220ENST00000411464 SMAD4Q13485 552 aaKnown RBP19.12■□□□□ 0.65
MRPL55-220ENST00000411464 RTN4RL1Q86UN2 441 aaPredicted RBP19.12■□□□□ 0.65
MRPL55-220ENST00000411464 NPAS4Q8IUM7 802 aa19.12■□□□□ 0.65
MRPL55-220ENST00000411464 FANCBQ8NB91 859 aa19.12■□□□□ 0.65
MRPL55-220ENST00000411464 SDF4Q9BRK5 362 aa19.12■□□□□ 0.65
MRPL55-220ENST00000411464 KCNH7Q9NS40 1196 aa19.12■□□□□ 0.65
MRPL55-220ENST00000411464 PCDHA2Q9Y5H9 948 aa19.12■□□□□ 0.65
MRPL55-220ENST00000411464 TRPV2Q9Y5S1 764 aa19.12■□□□□ 0.65
MRPL55-220ENST00000411464 MRPL42Q9Y6G3 142 aaKnown RBP19.12■□□□□ 0.65
MRPL55-220ENST00000411464 NDUFV1P49821 464 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 TMEM62Q0P6H9 643 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 ADAM15Q13444 863 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 PLPPR4Q7Z2D5 763 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 RAB11FIP4Q86YS3 637 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 NME8Q8N427 588 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 LINC01599Q8WXQ3 324 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 PCYT2Q99447 389 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 MXRA8Q9BRK3 442 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 CELF4Q9BZC1 486 aaKnown RBP19.11■□□□□ 0.65
MRPL55-220ENST00000411464 KCNH6Q9H252 994 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 LRFN2Q9ULH4 789 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 PADI3Q9ULW8 664 aa19.11■□□□□ 0.65
MRPL55-220ENST00000411464 STXBP3O00186 592 aa19.1■□□□□ 0.65
MRPL55-220ENST00000411464 LINC01565O15544 149 aa19.1■□□□□ 0.65
MRPL55-220ENST00000411464 TBX10O75333 385 aa19.1■□□□□ 0.65
MRPL55-220ENST00000411464 ITGB1P05556 798 aa19.1■□□□□ 0.65
MRPL55-220ENST00000411464 SCG2P13521 617 aa19.1■□□□□ 0.65
MRPL55-220ENST00000411464 STAT5BP51692 787 aa19.1■□□□□ 0.65
MRPL55-220ENST00000411464 ACTR2P61160 394 aa19.1■□□□□ 0.65
MRPL55-220ENST00000411464 CAMK1Q14012 370 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms