RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 DPH5Q9H2P9 285 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 CPVLQ9H3G5 476 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 TOPORSQ9NS56 1045 aaPredicted RBP9.85□□□□□ -0.83
PBRM1-208ENST00000410007 IPO11Q9UI26 975 aaKnown RBP9.85□□□□□ -0.83
PBRM1-208ENST00000410007 CNTNAP4Q9C0A0 1308 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 GOLGA8CPA6NN73 597 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 GOLGA8SH3BPF8 625 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 ZNF500O60304 480 aaPredicted RBP9.85□□□□□ -0.83
PBRM1-208ENST00000410007 GFPT2O94808 682 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 STAT3P40763 770 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 PHKA2P46019 1235 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 RFX6Q8HWS3 928 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 CDKL2Q92772 493 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 SLC38A10Q9HBR0 1119 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 CDC23Q9UJX2 597 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 FRMPD1Q5SYB0 1578 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 RNF40O75150 1001 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 SERPING1P05155 500 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 P4HBP07237 508 aaKnown RBP9.84□□□□□ -0.83
PBRM1-208ENST00000410007 MYL3P08590 195 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 AKR1B1P15121 316 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 HSPA6P17066 643 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 STX2P32856 288 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 ARL4AP40617 200 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 MUM1L1Q5H9M0 696 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 ADGRF4Q8IZF3 695 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 ARHGAP24Q8N264 748 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 FAM133AQ8N9E0 248 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 PIGOQ8TEQ8 1089 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 OTUD5Q96G74 571 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 DAGLAQ9Y4D2 1042 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 POTEMA6NI47 508 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 ENTPD3O75355 529 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 HOXD10P28358 340 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 NFX1Q12986 1120 aaKnown RBP9.84□□□□□ -0.83
PBRM1-208ENST00000410007 ANKRD20A3Q5VUR7 823 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 SIX6OS1Q8N1H7 587 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 PROM2Q8N271 834 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 MAGOHBQ96A72 148 aaKnown RBP9.84□□□□□ -0.83
PBRM1-208ENST00000410007 PLEKHA4Q9H4M7 779 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 RNF14Q9UBS8 474 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 SRGAP2BP0DMP2 458 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 FCER1AP12319 257 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 QARSP47897 775 aaKnown RBP9.84□□□□□ -0.83
PBRM1-208ENST00000410007 USP11P51784 963 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 PLCB4Q15147 1175 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 ADAT2Q7Z6V5 191 aaKnown RBP9.84□□□□□ -0.83
PBRM1-208ENST00000410007 VSTM4Q8IW00 320 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 PSPC1Q8WXF1 523 aaKnown RBP9.84□□□□□ -0.83
PBRM1-208ENST00000410007 CABS1Q96KC9 395 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 OSBPL5Q9H0X9 879 aaPredicted RBP9.84□□□□□ -0.83
PBRM1-208ENST00000410007 SEL1LQ9UBV2 794 aa9.84□□□□□ -0.83
PBRM1-208ENST00000410007 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
PBRM1-208ENST00000410007 USP42Q9H9J4 1324 aaKnown RBP9.84□□□□□ -0.84
PBRM1-208ENST00000410007 SPDYE16A6NNV3 312 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-208ENST00000410007 CLDN3O15551 220 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 SPDYE2Q495Y8 402 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 SBK1Q52WX2 424 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 ZNF667Q5HYK9 610 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 CEP85LQ5SZL2 805 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 ELMSAN1Q6PJG2 1045 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 HHIPL2Q6UWX4 724 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 RBM46Q8TBY0 533 aaKnown RBP9.83□□□□□ -0.84
PBRM1-208ENST00000410007 SLC16A10Q8TF71 515 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 BCORL1Q5H9F3 1711 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 TROVE2P10155 538 aaKnown RBP eCLIP9.83□□□□□ -0.84
PBRM1-208ENST00000410007 TCP11X2Q5H9J9 407 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 DSTYKQ6XUX3 929 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 SLC35F6Q8N357 371 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 XXYLT1Q8NBI6 393 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 RRAGDQ9NQL2 400 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-208ENST00000410007 JRKLQ9Y4A0 524 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 NTSR2O95665 410 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 ANXA13P27216 316 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 APBA1Q02410 837 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 SEMA3FQ13275 785 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 GKAP1Q5VSY0 366 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-208ENST00000410007 OR6B2Q6IFH4 312 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 TTBK2Q6IQ55 1244 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 GAS2L3Q86XJ1 694 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 THNSL1Q8IYQ7 743 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 RAD54LQ92698 747 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 C2orf40Q9H1Z8 148 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 ZNF302Q9NR11 478 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 GJB4Q9NTQ9 266 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 A0A0G2JLW4 131 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 GOLGA8IPA6NC78 632 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 ASB14A6NK59 587 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 GOLGA8JA6NMD2 632 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 CD58P19256 250 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 CDC27P30260 824 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 GARSP41250 739 aaKnown RBP9.83□□□□□ -0.84
PBRM1-208ENST00000410007 NKX1-1Q15270 411 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-208ENST00000410007 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 PPP4R1Q8TF05 950 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 MCUR1Q96AQ8 359 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 PPP1R16BQ96T49 567 aa9.83□□□□□ -0.84
PBRM1-208ENST00000410007 MMP19Q99542 508 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms