RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CCDC60Q8IWA6 550 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 SLFN12Q8IYM2 578 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 BADQ92934 168 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 UNC45AQ9H3U1 944 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 SAMM50Q9Y512 469 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 NRCAMQ92823 1304 aa22.4■■□□□ 1.18
PDLIM2-207ENST00000409417 MARCH6O60337 910 aa22.4■■□□□ 1.18
PDLIM2-207ENST00000409417 GNAT1P11488 350 aa22.4■■□□□ 1.18
PDLIM2-207ENST00000409417 MDM2Q00987 491 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-207ENST00000409417 HIC1Q14526 733 aa22.4■■□□□ 1.18
PDLIM2-207ENST00000409417 RDM1Q8NG50 284 aa22.4■■□□□ 1.18
PDLIM2-207ENST00000409417 ZNF302Q9NR11 478 aa22.4■■□□□ 1.18
PDLIM2-207ENST00000409417 SETD4Q9NVD3 440 aa22.4■■□□□ 1.18
PDLIM2-207ENST00000409417 CHMP2AO43633 222 aa22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 NEMFO60524 1076 aa22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 BAG4O95429 457 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 MCM7P33993 719 aa22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 ZNF200P98182 395 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 PPP2R5CQ13362 524 aa22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 ORC2Q13416 577 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 CALCRLQ16602 461 aa22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 CHRDL2Q6WN34 429 aa22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 TNPO1Q92973 898 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 PPP1R12CQ9BZL4 782 aa22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 VAV3Q9UKW4 847 aa22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 NOL7Q9UMY1 257 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 MAFBQ9Y5Q3 323 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-207ENST00000409417 PPFIA1Q13136 1202 aa22.38■■□□□ 1.17
PDLIM2-207ENST00000409417 PLCB4Q15147 1175 aa22.38■■□□□ 1.17
PDLIM2-207ENST00000409417 MFSD5Q6N075 450 aa22.38■■□□□ 1.17
PDLIM2-207ENST00000409417 PDXDC2PQ6P474 469 aa22.38■■□□□ 1.17
PDLIM2-207ENST00000409417 ATP6V0A1Q93050 837 aa22.38■■□□□ 1.17
PDLIM2-207ENST00000409417 PRO3102Q9H379 93 aa22.38■■□□□ 1.17
PDLIM2-207ENST00000409417 POTEB3A0JP26 581 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 PITPNM1O00562 1244 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 CYP2C18P33260 490 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 BMP8BP34820 402 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 ADAM17P78536 824 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 PTK7Q13308 1070 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 TTC38Q5R3I4 469 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 POTEBQ6S5H4 581 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 MIER3Q7Z3K6 550 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 SERINC5Q86VE9 423 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 ATP8B4Q8TF62 1192 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 LMBR1Q8WVP7 490 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 MTMR9Q96QG7 549 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 GABBR1Q9UBS5 961 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 TRPC6Q9Y210 931 aa22.37■■□□□ 1.17
PDLIM2-207ENST00000409417 INSRRP14616 1297 aa22.36■■□□□ 1.17
PDLIM2-207ENST00000409417 BFSP2Q13515 415 aa22.36■■□□□ 1.17
PDLIM2-207ENST00000409417 GRIK4Q16099 956 aa22.36■■□□□ 1.17
PDLIM2-207ENST00000409417 CCDC155Q8N6L0 562 aa22.36■■□□□ 1.17
PDLIM2-207ENST00000409417 CAGE1Q8TC20 777 aa22.36■■□□□ 1.17
PDLIM2-207ENST00000409417 FOXD4L1Q9NU39 408 aa22.36■■□□□ 1.17
PDLIM2-207ENST00000409417 UMODL1Q5DID0 1318 aa22.36■■□□□ 1.17
PDLIM2-207ENST00000409417 TRIOBPQ9H2D6 2365 aa22.36■■□□□ 1.17
PDLIM2-207ENST00000409417 RRN3P2A6NIE6 340 aa22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 TREHO43280 583 aa22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 TOB1P50616 345 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 RBL2Q08999 1139 aa22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 ZNF174Q15697 407 aa22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 TMEM199Q8N511 208 aa22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 DHX38Q92620 1227 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 PCDHA12Q9UN75 941 aa22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 COLQQ9Y215 455 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 IGSF9BQ9UPX0 1349 aa22.35■■□□□ 1.17
PDLIM2-207ENST00000409417 HBP1O60381 514 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 ATP4AP20648 1035 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 SYT1P21579 422 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 FPGSQ05932 587 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 SPIRE1Q08AE8 756 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 RILPL1Q5EBL4 403 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 CKAP2LQ8IYA6 745 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 RETREG2Q8NC44 543 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 UBE2OQ9C0C9 1292 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 WNT8AQ9H1J5 351 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 TMEM60Q9H2L4 133 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 LTBP2Q14767 1821 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 MBLAC1A4D2B0 266 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 EML1O00423 815 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 HSP90AA1P07900 732 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 MARCH8Q5T0T0 291 aa22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 BBXQ8WY36 941 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 TTC12Q9H892 705 aaPredicted RBP22.34■■□□□ 1.17
PDLIM2-207ENST00000409417 VPS37CA5D8V6 355 aaPredicted RBP22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 ZNF862O60290 1169 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 CSF2RAP15509 400 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 TXKP42681 527 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 CCL23P55773 120 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 PPIGQ13427 754 aaKnown RBP eCLIP22.33■■□□□ 1.161e-8■■■□□ 18.4
PDLIM2-207ENST00000409417 NBR1Q14596 966 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 TRIM71Q2Q1W2 868 aaKnown RBP22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 TAF2Q6P1X5 1199 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 WNT8BQ93098 351 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 FAM167AQ96KS9 214 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 TUBE1Q9UJT0 475 aa22.33■■□□□ 1.16
PDLIM2-207ENST00000409417 OR52Z1P0C646 297 aa22.32■■□□□ 1.16
PDLIM2-207ENST00000409417 CKBP12277 381 aa22.32■■□□□ 1.16
PDLIM2-207ENST00000409417 IGBP1P78318 339 aa22.32■■□□□ 1.16
PDLIM2-207ENST00000409417 UGCGQ16739 394 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms