RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 CDC25AP30304 524 aa22.97■■□□□ 1.27
VSX1-203ENST00000409285 TCF7P36402 384 aaPredicted RBP22.97■■□□□ 1.27
VSX1-203ENST00000409285 SP4Q02446 784 aa22.97■■□□□ 1.27
VSX1-203ENST00000409285 BRDTQ58F21 947 aaPredicted RBP22.97■■□□□ 1.27
VSX1-203ENST00000409285 NT5C3AQ9H0P0 336 aa22.97■■□□□ 1.27
VSX1-203ENST00000409285 SPC25Q9HBM1 224 aa22.97■■□□□ 1.27
VSX1-203ENST00000409285 XPNPEP3Q9NQH7 507 aa22.97■■□□□ 1.27
VSX1-203ENST00000409285 FAM13BQ9NYF5 915 aa22.97■■□□□ 1.27
VSX1-203ENST00000409285 SORBS3O60504 671 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 GADD45BO75293 160 aaPredicted RBP22.96■■□□□ 1.27
VSX1-203ENST00000409285 SLITRK3O94933 977 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 LYPLA2O95372 231 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 SPATA31C1P0DKV0 1188 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 FSCN1Q16658 493 aaKnown RBP22.96■■□□□ 1.27
VSX1-203ENST00000409285 DGKDQ16760 1214 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 LHX8Q68G74 356 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 CATSPER3Q86XQ3 398 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 CCDC60Q8IWA6 550 aaPredicted RBP22.96■■□□□ 1.27
VSX1-203ENST00000409285 ATP6V0A1Q93050 837 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 PYM1Q9BRP8 204 aaKnown RBP22.96■■□□□ 1.27
VSX1-203ENST00000409285 UNC93B1Q9H1C4 597 aa22.96■■□□□ 1.27
VSX1-203ENST00000409285 MAFBQ9Y5Q3 323 aaPredicted RBP22.96■■□□□ 1.27
VSX1-203ENST00000409285 DKC1O60832 514 aaKnown RBP eCLIP22.95■■□□□ 1.26
VSX1-203ENST00000409285 MED24O75448 989 aa22.95■■□□□ 1.26
VSX1-203ENST00000409285 PFKFB1P16118 471 aa22.95■■□□□ 1.26
VSX1-203ENST00000409285 PTMSP20962 102 aa22.95■■□□□ 1.26
VSX1-203ENST00000409285 CCT6AP40227 531 aaKnown RBP22.95■■□□□ 1.26
VSX1-203ENST00000409285 QARSP47897 775 aaKnown RBP22.95■■□□□ 1.26
VSX1-203ENST00000409285 SLC26A2P50443 739 aa22.95■■□□□ 1.26
VSX1-203ENST00000409285 FSIP1Q8NA03 581 aa22.95■■□□□ 1.26
VSX1-203ENST00000409285 CALML4Q96GE6 196 aa22.95■■□□□ 1.26
VSX1-203ENST00000409285 LXNQ9BS40 222 aa22.95■■□□□ 1.26
VSX1-203ENST00000409285 MYH11P35749 1972 aa22.95■■□□□ 1.26
VSX1-203ENST00000409285 CCL5P13501 91 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 PSMC5P62195 406 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 TMEM119Q4V9L6 283 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 FAM160B1Q5W0V3 765 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 PLPPR4Q7Z2D5 763 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 C4orf19Q8IY42 314 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 KLHDC9Q8NEP7 349 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 DYDC2Q96IM9 177 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 PCYT2Q99447 389 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 ZSWIM4Q9H7M6 989 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 RGL1Q9NZL6 768 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 CCDC39Q9UFE4 941 aa22.94■■□□□ 1.26
VSX1-203ENST00000409285 KPNA6O60684 536 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 LGALS2P05162 132 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 C6orf222P0C671 652 aaPredicted RBP22.93■■□□□ 1.26
VSX1-203ENST00000409285 GRB10Q13322 594 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 MTFR1Q15390 333 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 BANK1Q8NDB2 785 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 GOLPH3LQ9H4A5 285 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 SMARCAD1Q9H4L7 1026 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 AZI2Q9H6S1 392 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 ZNF302Q9NR11 478 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 GABBR1Q9UBS5 961 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 KCNH3Q9ULD8 1083 aa22.93■■□□□ 1.26
VSX1-203ENST00000409285 A0A1B0GVL5 298 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 POTEB3A0JP26 581 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 STAT5BP51692 787 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 NDUFA8P51970 172 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 CYP4A11Q02928 519 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 FAM160A1Q05DH4 1040 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 KIAA0100Q14667 2235 aaKnown RBP22.92■■□□□ 1.26
VSX1-203ENST00000409285 KARSQ15046 597 aaKnown RBP22.92■■□□□ 1.26
VSX1-203ENST00000409285 UGCGQ16739 394 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 CCSAPQ6IQ19 270 aaPredicted RBP22.92■■□□□ 1.26
VSX1-203ENST00000409285 SWSAP1Q6NVH7 229 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 POTEBQ6S5H4 581 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 CCDC73Q6ZRK6 1079 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 PNMA5Q96PV4 448 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 C16orf70Q9BSU1 422 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 A0A087X0B3 334 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 BACH1O14867 736 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 PGK1P00558 417 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 F2P00734 622 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 E2F4Q16254 413 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 ECM1Q16610 540 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 ENGASEQ8NFI3 743 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 CDK5RAP3Q96JB5 506 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 RNF208Q9H0X6 261 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 WRAP73Q9P2S5 460 aaPredicted RBP22.92■■□□□ 1.26
VSX1-203ENST00000409285 STK17AQ9UEE5 414 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 USP25Q9UHP3 1055 aa22.92■■□□□ 1.26
VSX1-203ENST00000409285 TRIP12Q14669 1992 aaPredicted RBP22.91■■□□□ 1.26
VSX1-203ENST00000409285 MYADML2A6NDP7 307 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 CCDC85CA6NKD9 419 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 ZNF862O60290 1169 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 ZEB2O60315 1214 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 XRCC6P12956 609 aaKnown RBP eCLIP22.91■■□□□ 1.26
VSX1-203ENST00000409285 PLCG1P19174 1290 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 SNW1Q13573 536 aaKnown RBP22.91■■□□□ 1.26
VSX1-203ENST00000409285 CTTNQ14247 550 aaKnown RBP22.91■■□□□ 1.26
VSX1-203ENST00000409285 PDXDC2PQ6P474 469 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 POTEGQ6S5H5 508 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 RNF180Q86T96 592 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 TPH2Q8IWU9 490 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 FMR1NBQ8N0W7 255 aaPredicted RBP22.91■■□□□ 1.26
VSX1-203ENST00000409285 PCSK9Q8NBP7 692 aaKnown RBP22.91■■□□□ 1.26
VSX1-203ENST00000409285 CUEDC2Q9H467 287 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms