RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 MTERF2Q49AM1 385 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 SDCCAG8Q86SQ7 713 aaPredicted RBP13.18□□□□□ -0.3
PCDH20-201ENST00000409204 ADGRF4Q8IZF3 695 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 KRT12Q99456 494 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 EMILIN3Q9NT22 766 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
PCDH20-201ENST00000409204 TCRBV5S4A2TA0A5A2 114 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 MEIS1O00470 390 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 MAN1A1P33908 653 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 IFRD2Q12894 506 aaPredicted RBP13.18□□□□□ -0.3
PCDH20-201ENST00000409204 BFSP1Q12934 665 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 LRRC8AQ8IWT6 810 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 BBOF1Q8ND07 529 aa13.18□□□□□ -0.3
PCDH20-201ENST00000409204 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 C16orf86Q6ZW13 317 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 RSRC2Q7L4I2 434 aaKnown RBP13.17□□□□□ -0.3
PCDH20-201ENST00000409204 TYW1Q9NV66 732 aaKnown RBP13.17□□□□□ -0.3
PCDH20-201ENST00000409204 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 RGL2O15211 777 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 RGS16O15492 202 aaPredicted RBP13.17□□□□□ -0.3
PCDH20-201ENST00000409204 CASP14P31944 242 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 SURF1Q15526 300 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 EEPD1Q7L9B9 569 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 METTL23Q86XA0 190 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 ZSCAN20P17040 1043 aaPredicted RBP13.17□□□□□ -0.3
PCDH20-201ENST00000409204 VPS41P49754 854 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 RNF207Q6ZRF8 634 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 ANKRD13CQ8N6S4 541 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 ENOX1Q8TC92 643 aaKnown RBP13.17□□□□□ -0.3
PCDH20-201ENST00000409204 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
PCDH20-201ENST00000409204 ZNF148Q9UQR1 794 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 A6NJR5 290 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 DDIT3P35638 169 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
PCDH20-201ENST00000409204 SHC4Q6S5L8 630 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 CEP57Q86XR8 500 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 WRNIP1Q96S55 665 aa13.17□□□□□ -0.3
PCDH20-201ENST00000409204 PFDN6O15212 129 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 MXI1P50539 228 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
PCDH20-201ENST00000409204 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
PCDH20-201ENST00000409204 TSC1Q92574 1164 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 HOMER3Q9NSC5 361 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 HOXC10Q9NYD6 342 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 LTN1O94822 1766 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 GBP1P32455 592 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 TROAPQ12815 778 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 SPP2Q13103 211 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 NEDD9Q14511 834 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 SNX25Q9H3E2 840 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 SAMSN1Q9NSI8 373 aaKnown RBP13.16□□□□□ -0.3
PCDH20-201ENST00000409204 LRFN2Q9ULH4 789 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
PCDH20-201ENST00000409204 FAM170AA1A519 330 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 UBE2Q2LH0YL09 131 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 PSMD14O00487 310 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 PPFIA4O75335 1185 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 CTNNA1P35221 906 aaKnown RBP13.16□□□□□ -0.3
PCDH20-201ENST00000409204 RINT1Q6NUQ1 792 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
PCDH20-201ENST00000409204 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 POTEMA6NI47 508 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 LMNB2Q03252 620 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 ANKRD20A3Q5VUR7 823 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 ARHGAP24Q8N264 748 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 BBS5Q8N3I7 341 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 PCDHA6Q9UN73 950 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 PCDHA8Q9Y5H6 950 aa13.16□□□□□ -0.3
PCDH20-201ENST00000409204 CLIC2O15247 247 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 MESDQ14696 234 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 RSBN1LQ6PCB5 846 aaPredicted RBP13.15□□□□□ -0.3
PCDH20-201ENST00000409204 NME8Q8N427 588 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 C2orf69Q8N8R5 385 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 Q3C1V9 767 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 RWDD2AQ9UIY3 292 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 K7ERI5 159 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 THAP12O43422 761 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 RNF40O75150 1001 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 EHHADHQ08426 723 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 RUNDC3BQ96NL0 473 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
PCDH20-201ENST00000409204 H7C0C1 242 aa13.15□□□□□ -0.31
PCDH20-201ENST00000409204 ATP5OP48047 213 aa13.15□□□□□ -0.31
PCDH20-201ENST00000409204 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.31
PCDH20-201ENST00000409204 ZNF543Q08ER8 600 aa13.15□□□□□ -0.31
PCDH20-201ENST00000409204 NFIAQ12857 509 aa13.15□□□□□ -0.31
PCDH20-201ENST00000409204 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.31
PCDH20-201ENST00000409204 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.31
PCDH20-201ENST00000409204 ZNF526Q8TF50 670 aaPredicted RBP13.15□□□□□ -0.31
PCDH20-201ENST00000409204 ZNF653Q96CK0 615 aa13.15□□□□□ -0.31
PCDH20-201ENST00000409204 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms