RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 XRCC5P13010 732 aaKnown RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 GPSM2P81274 684 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 DPH6Q7L8W6 267 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 ADGRF4Q8IZF3 695 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 SPATA20Q8TB22 786 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 PNMA2Q9UL42 364 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 CTNND1O60716 968 aaKnown RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 GBP2P32456 591 aaPredicted RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 FKBP3Q00688 224 aaKnown RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 GRM4Q14833 912 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 MUM1L1Q5H9M0 696 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 KLHDC7AQ5VTJ3 777 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 FBXL16Q8N461 479 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 PNMA5Q96PV4 448 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 KCND1Q9NSA2 647 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 SPOPO43791 374 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 LMBRD2Q68DH5 695 aaPredicted RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 ZNF507Q8TCN5 953 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 RAD54LQ92698 747 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 ARHGEF1Q92888 912 aaKnown RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 HOOK2Q96ED9 719 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 ELAC2Q9BQ52 826 aaKnown RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 ZC3H12CQ9C0D7 883 aaKnown RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 BLOC1S4Q9NUP1 217 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 GGA1Q9UJY5 639 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 MED1Q15648 1581 aaPredicted RBP9.1□□□□□ -0.95
SNX13-201ENST00000409076 NWD2Q9ULI1 1742 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 ARFGEF2Q9Y6D5 1785 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 TMEM150BA6NC51 233 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 EIF3HO15372 352 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNX13-201ENST00000409076 EXOC3O60645 756 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 EEF2P13639 858 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 TNFAIP3P21580 790 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 HNRNPH1P31943 449 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 LSP1P33241 339 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 TRAPPC10P48553 1259 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 CORO7P57737 925 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 NFIAQ12857 509 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 ARL6IP4Q66PJ3 421 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 HIBCHQ6NVY1 386 aaPredicted RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 VPS36Q86VN1 386 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 CCDC105Q8IYK2 499 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 KIF2BQ8N4N8 673 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 MMTAG2Q9BU76 263 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 ZNF287Q9HBT7 754 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 LRRC4CQ9HCJ2 640 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 KLHL11Q9NVR0 708 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 KBTBD4Q9NVX7 518 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 DBR1Q9UK59 544 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 NOC2LQ9Y3T9 749 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 ITIH6Q6UXX5 1313 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 A0A087WUV0 522 aaPredicted RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 ANKRD62A6NC57 917 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 SART1O43290 800 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 MIGA2Q7L4E1 593 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 CPNE8Q86YQ8 564 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 CUL5Q93034 780 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 ZNF668Q96K58 619 aaPredicted RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 HEMGNQ9BXL5 484 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 MST1RQ04912 1400 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 SEMA3EO15041 775 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 KRT5P13647 590 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 PLCG2P16885 1265 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 MAP2K2P36507 400 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 UNC13DQ70J99 1090 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 ZFPM1Q8IX07 1006 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 CCDC170Q8IYT3 715 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 SUPT20HQ8NEM7 779 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 WDR66Q8TBY9 1149 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 ZNF473Q8WTR7 871 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 HNRNPLLQ8WVV9 542 aaKnown RBP9.09□□□□□ -0.95
SNX13-201ENST00000409076 HAUS1Q96CS2 278 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 CCT8L2Q96SF2 557 aa9.09□□□□□ -0.95
SNX13-201ENST00000409076 GOLGA6L10A0A0M3HER8 536 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 ZNF233A6NK53 670 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 TCP10L2B9ZVM9 353 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 GOLGA8KD6RF30 607 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 H2AFZP0C0S5 128 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 KCNMA1Q12791 1236 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 SEPT2Q15019 361 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 GRIPAP1Q4V328 841 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 FAM47EQ6ZV65 393 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 H2AFVQ71UI9 128 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 NLRP14Q86W24 1093 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 PPM1KQ8N3J5 372 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 ARHGAP23Q9P227 1491 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 FER1L4A9Z1Z3 1794 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 MED24O75448 989 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 MRPL12P52815 198 aaKnown RBP9.08□□□□□ -0.96
SNX13-201ENST00000409076 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 PPP2R5BQ15173 497 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 PAPD7Q5XG87 772 aaKnown RBP9.08□□□□□ -0.96
SNX13-201ENST00000409076 KAZNQ674X7 775 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 TRIM68Q6AZZ1 485 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 PRUNE1Q86TP1 453 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 EFCAB13Q8IY85 973 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 BANK1Q8NDB2 785 aa9.08□□□□□ -0.96
SNX13-201ENST00000409076 PWWP2AQ96N64 755 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms