RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 NELFCDQ8IXH7 590 aa21■□□□□ 0.95
USP39-202ENST00000409025 ZC3H15Q8WU90 426 aaKnown RBP21■□□□□ 0.95
USP39-202ENST00000409025 KIF2AO00139 706 aaPredicted RBP21■□□□□ 0.95
USP39-202ENST00000409025 ZSCAN12O43309 604 aa21■□□□□ 0.95
USP39-202ENST00000409025 EPHX2P34913 555 aa21■□□□□ 0.95
USP39-202ENST00000409025 FKBP15Q5T1M5 1219 aa21■□□□□ 0.95
USP39-202ENST00000409025 C1orf186Q6ZWK4 172 aa21■□□□□ 0.95
USP39-202ENST00000409025 BANK1Q8NDB2 785 aa21■□□□□ 0.95
USP39-202ENST00000409025 PURBQ96QR8 312 aaKnown RBP21■□□□□ 0.95
USP39-202ENST00000409025 PTPRFP10586 1907 aa20.99■□□□□ 0.95
USP39-202ENST00000409025 LOXHD1Q8IVV2 1947 aa20.99■□□□□ 0.95
USP39-202ENST00000409025 TRAF5O00463 557 aa20.99■□□□□ 0.95
USP39-202ENST00000409025 P4HBP07237 508 aaKnown RBP20.99■□□□□ 0.95
USP39-202ENST00000409025 MIIPQ5JXC2 388 aa20.99■□□□□ 0.95
USP39-202ENST00000409025 PPP4R3CPQ6ZMV5 832 aa20.99■□□□□ 0.95
USP39-202ENST00000409025 NSUN6Q8TEA1 469 aaKnown RBP20.99■□□□□ 0.95
USP39-202ENST00000409025 CDCA5Q96FF9 252 aa20.99■□□□□ 0.95
USP39-202ENST00000409025 CEP63Q96MT8 703 aa20.99■□□□□ 0.95
USP39-202ENST00000409025 KCND2Q9NZV8 630 aa20.99■□□□□ 0.95
USP39-202ENST00000409025 WRAP73Q9P2S5 460 aaPredicted RBP20.99■□□□□ 0.95
USP39-202ENST00000409025 TESPA1A2RU30 521 aaPredicted RBP20.98■□□□□ 0.95
USP39-202ENST00000409025 FAM13AO94988 1023 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 NR3C2P08235 984 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 PPATQ06203 517 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 MAN2A1Q16706 1144 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 VWA3BQ502W6 1294 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 TREML2Q5T2D2 321 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 VSIG10LQ86VR7 867 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 ANKRD13AQ8IZ07 590 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 CNKSR2Q8WXI2 1034 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 NUP58Q9BVL2 599 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 KCTD10Q9H3F6 313 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 ZSWIM4Q9H7M6 989 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 ELP3Q9H9T3 547 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 SAMM50Q9Y512 469 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 RSPH10B2B2RC85 870 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 ZBTB39O15060 712 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 RSPH10BP0C881 870 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 EPM2AIP1Q7L775 607 aaPredicted RBP20.98■□□□□ 0.95
USP39-202ENST00000409025 NLRX1Q86UT6 975 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 MRPL44Q9H9J2 332 aaKnown RBP20.98■□□□□ 0.95
USP39-202ENST00000409025 CYP39A1Q9NYL5 469 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 TCEAL9Q9UHQ7 104 aa20.98■□□□□ 0.95
USP39-202ENST00000409025 GNA14O95837 355 aa20.97■□□□□ 0.95
USP39-202ENST00000409025 TTLL12Q14166 644 aaPredicted RBP20.97■□□□□ 0.95
USP39-202ENST00000409025 EDRF1Q3B7T1 1238 aa20.97■□□□□ 0.95
USP39-202ENST00000409025 GADL1Q6ZQY3 521 aa20.97■□□□□ 0.95
USP39-202ENST00000409025 ERO1BQ86YB8 467 aa20.97■□□□□ 0.95
USP39-202ENST00000409025 GPRASP2Q96D09 838 aa20.97■□□□□ 0.95
USP39-202ENST00000409025 A1CFQ9NQ94 594 aaKnown RBP20.97■□□□□ 0.95
USP39-202ENST00000409025 OLFML3Q9NRN5 406 aa20.97■□□□□ 0.95
USP39-202ENST00000409025 ABHD10Q9NUJ1 306 aa20.97■□□□□ 0.95
USP39-202ENST00000409025 PAXBP1Q9Y5B6 917 aa20.97■□□□□ 0.95
USP39-202ENST00000409025 ARHGEF35A5YM69 484 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 MAFGO15525 162 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 TUBB4AP04350 444 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 FECHP22830 423 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 KRT9P35527 623 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 CASP5P51878 434 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 RETREG2Q8NC44 543 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 PROCA1Q8NCQ7 364 aaPredicted RBP20.96■□□□□ 0.95
USP39-202ENST00000409025 CHST13Q8NET6 341 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 OTUD5Q96G74 571 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 ERGIC2Q96RQ1 377 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 NDST4Q9H3R1 872 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 PPP2R2CQ9Y2T4 447 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 JAK3P52333 1124 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 SYCP1Q15431 976 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 KNOP1Q1ED39 458 aaKnown RBP20.96■□□□□ 0.95
USP39-202ENST00000409025 CCDC40Q4G0X9 1142 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 MYCT1Q8N699 235 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 PCMTD1Q96MG8 357 aaPredicted RBP20.96■□□□□ 0.95
USP39-202ENST00000409025 ODF2LQ9ULJ1 636 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 CAPN11Q9UMQ6 739 aa20.96■□□□□ 0.95
USP39-202ENST00000409025 LUC7L2Q9Y383 392 aaKnown RBP20.96■□□□□ 0.95
USP39-202ENST00000409025 LOC285556D6RIA3 1793 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 A0A0G2JLL6 359 aaPredicted RBP20.95■□□□□ 0.94
USP39-202ENST00000409025 TTC26A0AVF1 554 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 SOWAHDA6NJG2 315 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 RNF225M0QZC1 329 aaPredicted RBP20.95■□□□□ 0.94
USP39-202ENST00000409025 CXCL11O14625 94 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 IRF6O14896 467 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 MYBP10242 640 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 SFNP31947 248 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 QARSP47897 775 aaKnown RBP20.95■□□□□ 0.94
USP39-202ENST00000409025 KRT76Q01546 638 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 BMT2Q1RMZ1 405 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 LBX2Q6XYB7 198 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 PRRT2Q7Z6L0 340 aaPredicted RBP20.95■□□□□ 0.94
USP39-202ENST00000409025 TMTC1Q8IUR5 882 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 ZNF592Q92610 1267 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 PARVGQ9HBI0 331 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 SEL1LQ9UBV2 794 aa20.95■□□□□ 0.94
USP39-202ENST00000409025 UQCRHLA0A096LP55 91 aa20.94■□□□□ 0.94
USP39-202ENST00000409025 GOLGA6L9A6NEM1 432 aa20.94■□□□□ 0.94
USP39-202ENST00000409025 GLTPD2A6NH11 291 aa20.94■□□□□ 0.94
USP39-202ENST00000409025 SPDYE5A6NIY4 337 aa20.94■□□□□ 0.94
USP39-202ENST00000409025 ATP9AO75110 1047 aa20.94■□□□□ 0.94
USP39-202ENST00000409025 GCNT3O95395 438 aa20.94■□□□□ 0.94
USP39-202ENST00000409025 UQCRHP07919 91 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms