RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 THOC5Q13769 683 aaKnown RBP13.94□□□□□ -0.18
RNF43-201ENST00000407977 SURF1Q15526 300 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 ANO5Q75V66 913 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 SLITRK6Q9H5Y7 841 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 KRT82Q9NSB4 513 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 PPARGC1AQ9UBK2 798 aaKnown RBP13.94□□□□□ -0.18
RNF43-201ENST00000407977 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 RASSF10A6NK89 507 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 RASA4BC9J798 803 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 RASA4O43374 803 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 CHEK2O96017 543 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 SPOPLQ6IQ16 392 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 RBM41Q96IZ5 413 aaKnown RBP13.94□□□□□ -0.18
RNF43-201ENST00000407977 BTG4Q9NY30 223 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 ADGRG1Q9Y653 693 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 WDR19Q8NEZ3 1342 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 A0A087WWV3 80 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 M0R2C6 588 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 PALMO75781 387 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 LARGE1O95461 756 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 BTDP43251 543 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 PHKA1P46020 1223 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 MAGOHP61326 146 aaKnown RBP13.94□□□□□ -0.18
RNF43-201ENST00000407977 BEND6Q5SZJ8 279 aaPredicted RBP13.94□□□□□ -0.18
RNF43-201ENST00000407977 METTL13Q8N6R0 699 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 CEP70Q8NHQ1 597 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 ATP6V1E2Q96A05 226 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 CEP19Q96LK0 163 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 POLR3CQ9BUI4 534 aaPredicted RBP13.94□□□□□ -0.18
RNF43-201ENST00000407977 KLC4Q9NSK0 619 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 THRAP3Q9Y2W1 955 aaKnown RBP13.94□□□□□ -0.18
RNF43-201ENST00000407977 PHKG2P15735 406 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 CASP2P42575 452 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 TMPRSS15P98073 1019 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 POLA2Q14181 598 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 KCTD6Q8NC69 237 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 TTC1Q99614 292 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 YIPF3Q9GZM5 350 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 TAF1DQ9H5J8 278 aaPredicted RBP13.94□□□□□ -0.18
RNF43-201ENST00000407977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.182e-11■■■□□ 15.2
RNF43-201ENST00000407977 GCC2Q8IWJ2 1684 aa13.94□□□□□ -0.18
RNF43-201ENST00000407977 KLC3Q6P597 504 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 TMED8Q6PL24 325 aaPredicted RBP13.93□□□□□ -0.18
RNF43-201ENST00000407977 UNC13DQ70J99 1090 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 EPM2AIP1Q7L775 607 aaPredicted RBP13.93□□□□□ -0.18
RNF43-201ENST00000407977 DHX38Q92620 1227 aaKnown RBP13.93□□□□□ -0.18
RNF43-201ENST00000407977 A0A0G2JND7 137 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 PALM3A6NDB9 673 aaPredicted RBP13.93□□□□□ -0.18
RNF43-201ENST00000407977 RCAN1P53805 252 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 GTF2IP78347 998 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 CHRNDQ07001 517 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 ARID5BQ14865 1188 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 DEPDC1BQ8WUY9 529 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 KMT5AQ9NQR1 393 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 PLA2G4BP0C869 781 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 PMS2P54278 862 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 SRLQ86TD4 932 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 FMR1NBQ8N0W7 255 aaPredicted RBP13.93□□□□□ -0.18
RNF43-201ENST00000407977 SLC7A3Q8WY07 619 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 NDE1Q9NXR1 346 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 NOC2LQ9Y3T9 749 aaKnown RBP13.93□□□□□ -0.18
RNF43-201ENST00000407977 KIAA0556O60303 1618 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 FAM170AA1A519 330 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
RNF43-201ENST00000407977 FOXP2O15409 715 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 CFLARO15519 480 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 MAN1A2O60476 641 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 TTLL1O95922 423 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 CHRNA3P32297 505 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 CDR2Q01850 454 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 ZNF577Q9BSK1 485 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 MTA3Q9BTC8 594 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 TRIM33Q9UPN9 1127 aa13.93□□□□□ -0.18
RNF43-201ENST00000407977 ZNF608Q9ULD9 1512 aaPredicted RBP13.93□□□□□ -0.18
RNF43-201ENST00000407977 H0YIN7 160 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 PRPSAP2O60256 369 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 FBXL13Q8NEE6 735 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 CYTH2Q99418 400 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 SLC5A4Q9NY91 659 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 TLR7Q9NYK1 1049 aaKnown RBP13.92□□□□□ -0.18
RNF43-201ENST00000407977 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 KPNA7A9QM74 516 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 TMEM232C9JQI7 657 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 LARGE2Q8N3Y3 721 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 OSBPL9Q96SU4 736 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 CALN1Q9BXU9 219 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 EDEM3Q9BZQ6 932 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 INTUQ9ULD6 942 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 SNX24Q9Y343 169 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 MAP3K15Q6ZN16 1313 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 MEFVO15553 781 aaPredicted RBP13.92□□□□□ -0.18
RNF43-201ENST00000407977 HSPA4LO95757 839 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 CYP2C19P33261 490 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 ORC2Q13416 577 aaPredicted RBP13.92□□□□□ -0.18
RNF43-201ENST00000407977 TAF1BQ53T94 588 aaPredicted RBP13.92□□□□□ -0.18
RNF43-201ENST00000407977 C1orf146Q5VVC0 180 aa13.92□□□□□ -0.18
RNF43-201ENST00000407977 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.92□□□□□ -0.18
RNF43-201ENST00000407977 VPS39Q96JC1 886 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms