RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TRIM14Q14142 442 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 KCNB1Q14721 858 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 E2F4Q16254 413 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 ZNF658Q5TYW1 1059 aaPredicted RBP14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 OLFML2BQ68BL8 750 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 NYAP1Q6ZVC0 841 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 PPFIBP1Q86W92 1011 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 ADGRF4Q8IZF3 695 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 C4orf32Q8N8J7 132 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 NOC3LQ8WTT2 800 aaKnown RBP14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 CCDC51Q96ER9 411 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 HSD3B7Q9H2F3 369 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 RIOX1Q9H6W3 641 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 VAT1LQ9HCJ6 419 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 SLC5A4Q9NY91 659 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 RWDD2AQ9UIY3 292 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 MYO9BQ13459 2157 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 GRXCR1A8MXD5 290 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 CTIFO43310 598 aaKnown RBP14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 STRNO43815 780 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 COBLO75128 1261 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 PGK1P00558 417 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 FDX1P10109 184 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 ATP1A3P13637 1013 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 BMP6P22004 513 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 SNAP25P60880 206 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 TMEM266Q2M3C6 531 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 ARMCX5Q6P1M9 558 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 USP49Q70CQ1 688 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 NEK8Q86SG6 692 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 GPKOWQ92917 476 aaPredicted RBP eCLIP14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 MOV10L1Q9BXT6 1211 aaKnown RBP14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 TMX1Q9H3N1 280 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 SLC38A10Q9HBR0 1119 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 DISC1Q9NRI5 854 aa14.4□□□□□ -0.1
SMARCB1-203ENST00000407082 A0A1B0GTH6 734 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 SLC26A4O43511 780 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 RPN1P04843 607 aaKnown RBP14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 OR52Z1P0C646 297 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 RARBP10826 455 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 ERCC3P19447 782 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 PBX2P40425 430 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 TBX2Q13207 712 aaPredicted RBP14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 CUL4BQ13620 913 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 NR1I3Q14994 352 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 TMEM132BQ14DG7 1078 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 PDXDC2PQ6P474 469 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 RNF180Q86T96 592 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 NCAPG2Q86XI2 1143 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 CPXCR1Q8N123 301 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 REXO1Q8N1G1 1221 aaKnown RBP14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 CALML4Q96GE6 196 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 PANX2Q96RD6 677 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 BAZ2BQ9UIF8 2168 aaKnown RBP14.39□□□□□ -0.11
SMARCB1-203ENST00000407082 DCDC2CA8MYV0 355 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 AKR1B15C9JRZ8 316 aaPredicted RBP14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 KIAA0355O15063 1070 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 CYTH3O43739 400 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 ADCY7P51828 1080 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 PAK1Q13153 545 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 ARID5BQ14865 1188 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 INF2Q27J81 1249 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 C1orf53Q5VUE5 145 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 CCDC174Q6PII3 467 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 GRAMD1CQ8IYS0 662 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 REPS2Q8NFH8 660 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 SRRTQ9BXP5 876 aaKnown RBP14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 SPATC1LQ9H0A9 340 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 RANBP17Q9H2T7 1088 aaKnown RBP14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 JMJD4Q9H9V9 463 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 RAVER2Q9HCJ3 691 aaKnown RBP14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 NCOR1O75376 2440 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
SMARCB1-203ENST00000407082 PARP14Q460N5 1801 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 A0A087X0B3 334 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 PNMA6FA0A0J9YX94 578 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 BICDL2A1A5D9 508 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 PPP1R3GB7ZBB8 358 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 STAT3P40763 770 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 MRPL12P52815 198 aaKnown RBP14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 TRAF1Q13077 416 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 CDC37Q16543 378 aaPredicted RBP14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 CDKAL1Q5VV42 579 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 CNGA4Q8IV77 575 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 FAM114A1Q8IWE2 563 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 MICALL1Q8N3F8 863 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 ZNF592Q92610 1267 aa14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 NECAB3Q96P71 396 aaPredicted RBP14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 BAG1Q99933 345 aaPredicted RBP14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 LIMA1Q9UHB6 759 aaKnown RBP14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 ZNF214Q9UL59 606 aaPredicted RBP14.37□□□□□ -0.11
SMARCB1-203ENST00000407082 BDP1A6H8Y1 2624 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms