RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 RB1P06400 928 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 CTSHP09668 335 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 SMIM10L2AP0DMW4 78 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 SMIM10L2BP0DMW5 78 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 DNAJB1P25685 340 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 HSD17B4P51659 736 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 PTPN5P54829 565 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 SMAD4Q13485 552 aaKnown RBP7.18□□□□□ -1.26
RPA3-204ENST00000406109 CBX2Q14781 532 aaPredicted RBP7.18□□□□□ -1.26
RPA3-204ENST00000406109 QRICH1Q2TAL8 776 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 GPATCH4Q5T3I0 446 aaKnown RBP7.18□□□□□ -1.26
RPA3-204ENST00000406109 STOX1Q6ZVD7 989 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 VSIG10LQ86VR7 867 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 DHX37Q8IY37 1157 aaKnown RBP7.18□□□□□ -1.26
RPA3-204ENST00000406109 CRIPAKQ8N1N5 446 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 IL31RAQ8NI17 732 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 SEPT8Q92599 483 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 ATP6V0A1Q93050 837 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 RNF25Q96BH1 459 aaPredicted RBP7.18□□□□□ -1.26
RPA3-204ENST00000406109 ZNF689Q96CS4 500 aaPredicted RBP7.18□□□□□ -1.26
RPA3-204ENST00000406109 IL17RAQ96F46 866 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 SPATA33Q96N06 139 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 PDCD2LQ9BRP1 358 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 IFIH1Q9BYX4 1025 aaKnown RBP7.18□□□□□ -1.26
RPA3-204ENST00000406109 CNNM2Q9H8M5 875 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 JMJD4Q9H9V9 463 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 CLEC1BQ9P126 229 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 MRVI1Q9Y6F6 885 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 ABCB11O95342 1321 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 NEDD4P46934 1319 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 GPR179Q6PRD1 2367 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 LAMA1P25391 3075 aa7.18□□□□□ -1.26
RPA3-204ENST00000406109 ZZEF1O43149 2961 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 OTOGLQ3ZCN5 2332 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 C17orf102A2RUQ5 167 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 H3BRB1 525 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 STXBP3O00186 592 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 RIOK3O14730 519 aaKnown RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 SLC27A2O14975 620 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 PPP1R11O60927 126 aaPredicted RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 CAND2O75155 1236 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 GGPS1O95749 300 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 GLP2RO95838 553 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 CHRNA1P02708 482 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 LGALS2P05162 132 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 UBA1P22314 1058 aaKnown RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 CTNNB1P35222 781 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 VCPP55072 806 aaKnown RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 ZXDAP98168 799 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 NECTIN1Q15223 517 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 CCDC178Q5BJE1 867 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 FAM26DQ5JW98 314 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 ARHGEF16Q5VV41 709 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 CREB3L3Q68CJ9 461 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 CYB5R4Q7L1T6 521 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 RALYLQ86SE5 291 aaKnown RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 IQCA1Q86XH1 822 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 MCF2L2Q86YR7 1114 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 FIBCD1Q8N539 461 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 SMRP1Q8NCR6 262 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 NCOA7Q8NI08 942 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 PBXIP1Q96AQ6 731 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 ASIC4Q96FT7 647 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 ZFP91Q96JP5 570 aaPredicted RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 ZSCAN10Q96SZ4 725 aaPredicted RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 POP1Q99575 1024 aaKnown RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 UBAC1Q9BSL1 405 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 TUT1Q9H6E5 874 aaKnown RBP7.17□□□□□ -1.26
RPA3-204ENST00000406109 EHMT1Q9H9B1 1298 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 SETD4Q9NVD3 440 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 CD207Q9UJ71 328 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 PLAGL2Q9UPG8 496 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 TAF6LQ9Y6J9 622 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 KIAA1671Q9BY89 1806 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 LOXHD1Q8IVV2 1947 aa7.17□□□□□ -1.26
RPA3-204ENST00000406109 FRYQ5TBA9 3013 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.16□□□□□ -1.26
RPA3-204ENST00000406109 ERICH2A1L162 156 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 ENPP3O14638 875 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 IFIT3O14879 490 aaKnown RBP7.16□□□□□ -1.26
RPA3-204ENST00000406109 CFBP00751 764 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 MMP1P03956 469 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 TGFB3P10600 412 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 MYCLP12524 364 aaPredicted RBP7.16□□□□□ -1.26
RPA3-204ENST00000406109 NT5C2P49902 561 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 COASYQ13057 564 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 SEMA3FQ13275 785 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 PGM5Q15124 567 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 SLC35G1Q2M3R5 365 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 VARS2Q5ST30 1063 aaKnown RBP7.16□□□□□ -1.26
RPA3-204ENST00000406109 RNF20Q5VTR2 975 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 ADGRD2Q7Z7M1 963 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 DGKHQ86XP1 1220 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 STAG2Q8N3U4 1231 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 FBXL6Q8N531 539 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 PNMA1Q8ND90 353 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 SPPL3Q8TCT6 385 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 APBB2Q92870 758 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 MTMR8Q96EF0 704 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 C11orf84Q9BUA3 381 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms