RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 DDX12PQ92771 950 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 KLHL29Q96CT2 875 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 STAMBPL1Q96FJ0 436 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 NAP1L4Q99733 375 aaKnown RBP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 TMEM109Q9BVC6 243 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 ROPN1BQ9BZX4 212 aaPredicted RBP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 VCXQ9H320 206 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 PABPC3Q9H361 631 aaKnown RBP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 SEMA6BQ9H3T3 888 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 ROPN1Q9HAT0 212 aaPredicted RBP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 SLC24A3Q9HC58 644 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 GOPCQ9HD26 462 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 SLC39A2Q9NP94 309 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 ATP8A2Q9NTI2 1148 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 TXLNGQ9NUQ3 528 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 ETAA1Q9NY74 926 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 SEC63Q9UGP8 760 aaKnown RBP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 AMFRQ9UKV5 643 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 PCDHA6Q9UN73 950 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 ARL2BPQ9Y2Y0 163 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 NOC2LQ9Y3T9 749 aaKnown RBP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 DAAM1Q9Y4D1 1078 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 USP15Q9Y4E8 981 aaPredicted RBP4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 PCDHA8Q9Y5H6 950 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 C1orf167Q5SNV9 1468 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 SPATA31A3Q5VYP0 1347 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 TJP1Q07157 1748 aa4.92□□□□□ -1.62
HDGFP1-201ENST00000405943 SCN11AQ9UI33 1791 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 TNS2Q63HR2 1409 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 COL22A1Q8NFW1 1626 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 POTEFA5A3E0 1075 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 PP2D1A8MPX8 630 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ERVV-1B6SEH8 477 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 F8W031 263 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 TRAF5O00463 557 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 EPHB6O15197 1021 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 HNRNPCL1O60812 293 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 DIAPH2O60879 1101 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 SMNDC1O75940 238 aaKnown RBP eCLIP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 SNUPNO95149 360 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 GGPS1O95749 300 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 FESP07332 822 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 H2AFZP0C0S5 128 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 POTEIP0CG38 1075 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 POTEJP0CG39 1038 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 FCER1AP12319 257 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 PECAM1P16284 738 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 LMNB1P20700 586 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ECHS1P30084 290 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 CEBPAP49715 358 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 RASSF2P50749 326 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 FXR2P51116 673 aaKnown RBP eCLIP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 CCNHP51946 323 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 RNASE9P60153 205 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 PTENP60484 403 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 CCDC15Q0P6D6 951 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 PDIA5Q14554 519 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 GRM4Q14833 912 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 SETDB1Q15047 1291 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 TAF11Q15544 211 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 UAP1Q16222 522 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 EDRF1Q3B7T1 1238 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 FAM133BQ5BKY9 247 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 CMPK2Q5EBM0 449 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 CDCA2Q69YH5 1023 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 MIS18BP1Q6P0N0 1132 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 SLC30A9Q6PML9 568 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 POTEEQ6S8J3 1075 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 LRRC55Q6ZSA7 311 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 CEP128Q6ZU80 1094 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 H2AFVQ71UI9 128 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 TRMT10CQ7L0Y3 403 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 APBB1IPQ7Z5R6 666 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 DAAM2Q86T65 1068 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 CCDC65Q8IXS2 484 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 UBL4BQ8N7F7 174 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 KIAA0895Q8NCT3 520 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 FBXO41Q8TF61 875 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 SDR42E1Q8WUS8 393 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 SHISA4Q96DD7 197 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 DTNBP1Q96EV8 351 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 THOC1Q96FV9 657 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ACSBG1Q96GR2 724 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 L3MBTL3Q96JM7 780 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 FAM210AQ96ND0 272 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ZNF317Q96PQ6 595 aaPredicted RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ORAI2Q96SN7 254 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 PLIN2Q99541 437 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 TSC22D3Q99576 134 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ELAC2Q9BQ52 826 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ERP44Q9BS26 406 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 SPZ1Q9BXG8 430 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 AP1M1Q9BXS5 423 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 NT5C3AQ9H0P0 336 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 CARD9Q9H257 536 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ECT2Q9H8V3 914 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 KIF9Q9HAQ2 790 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 RXFP1Q9HBX9 757 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms