RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 USP17L2Q6R6M4 530 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 KCTD1Q719H9 257 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 PDIK1LQ8N165 341 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 PPWD1Q96BP3 646 aaKnown RBP14.39□□□□□ -0.11
SNED1-205ENST00000405547 TAF1DQ9H5J8 278 aaPredicted RBP14.39□□□□□ -0.11
SNED1-205ENST00000405547 KIF20BQ96Q89 1820 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 IQANK1A0A1B0GTG1 560 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 GPC4O75487 556 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 STAT2P52630 851 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 DNAJC24Q6P3W2 148 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 NIM1KQ8IY84 436 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 PDZD8Q8NEN9 1154 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 BRIP1Q9BX63 1249 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 KMT5AQ9NQR1 393 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 CCDC68Q9H2F9 335 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 SUDS3Q9H7L9 328 aaPredicted RBP14.39□□□□□ -0.11
SNED1-205ENST00000405547 TJP3O95049 919 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 NME8Q8N427 588 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 PYROXD1Q8WU10 500 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 ELAC2Q9BQ52 826 aaKnown RBP14.39□□□□□ -0.11
SNED1-205ENST00000405547 ACTN1P12814 892 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 RASGRF1Q13972 1273 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 PI16Q6UXB8 463 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 ANKRD36BP1Q96IX9 119 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 VIPAS39Q9H9C1 493 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 USP27XA6NNY8 438 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 CRKLP46109 303 aaKnown RBP14.39□□□□□ -0.11
SNED1-205ENST00000405547 KSR1Q8IVT5 923 aa14.39□□□□□ -0.11
SNED1-205ENST00000405547 USP14P54578 494 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 PPP2R2AP63151 447 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 LY9Q9HBG7 655 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 NRBP2Q9NSY0 501 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 PPIP5K2O43314 1243 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 PFKFB3Q16875 520 aaPredicted RBP14.38□□□□□ -0.11
SNED1-205ENST00000405547 PIGSQ96S52 555 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 GJB4Q9NTQ9 266 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 ASAP1Q9ULH1 1129 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 GOLGA4Q13439 2230 aaKnown RBP14.38□□□□□ -0.11
SNED1-205ENST00000405547 SRGAP2BP0DMP2 458 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 DCAF15Q66K64 600 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 SLC7A3Q8WY07 619 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 NOD1Q9Y239 953 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 FAM160B1Q5W0V3 765 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 CDHR1Q96JP9 859 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 VIRMAQ69YN4 1812 aaKnown RBP14.38□□□□□ -0.11
SNED1-205ENST00000405547 ERBB3P21860 1342 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 LMTK3Q96Q04 1460 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 H7C1W4 665 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 ZBTB17Q13105 803 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 SEPT9Q9UHD8 586 aaPredicted RBP14.38□□□□□ -0.11
SNED1-205ENST00000405547 PRAMEF22A3QJZ6 481 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 EXOC8Q8IYI6 725 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 DDX17Q92841 729 aaKnown RBP14.38□□□□□ -0.11
SNED1-205ENST00000405547 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.38□□□□□ -0.11
SNED1-205ENST00000405547 LRRIQ1Q96JM4 1722 aa14.38□□□□□ -0.11
SNED1-205ENST00000405547 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 SCNN1DP51172 638 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 TMC4Q7Z404 712 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 KCTD6Q8NC69 237 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 TTC25Q96NG3 672 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 CFAP73A6NFT4 308 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 KRT1P04264 644 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 MAGOHP61326 146 aaKnown RBP14.37□□□□□ -0.11
SNED1-205ENST00000405547 FAM98CQ17RN3 349 aaKnown RBP14.37□□□□□ -0.11
SNED1-205ENST00000405547 PCGF5Q86SE9 256 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 KIAA0825Q8IV33 1275 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 BEND6Q5SZJ8 279 aaPredicted RBP14.37□□□□□ -0.11
SNED1-205ENST00000405547 LRRC37BQ96QE4 947 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 MED10Q9BTT4 135 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 SAT1P21673 171 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 ROBO2Q9HCK4 1378 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 PLEKHA8P1O95397 391 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 ALX1Q15699 326 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 COA7Q96BR5 231 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 SPDL1Q96EA4 605 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 ZCCHC17Q9NP64 241 aaKnown RBP14.37□□□□□ -0.11
SNED1-205ENST00000405547 SPECC1L-ADORA2AF8WAN1 911 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 KPNA2P52292 529 aaKnown RBP14.37□□□□□ -0.11
SNED1-205ENST00000405547 BASP1P80723 227 aaKnown RBP14.37□□□□□ -0.11
SNED1-205ENST00000405547 DRP2Q13474 957 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 CRLF3Q8IUI8 442 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 ANKRD7Q92527 254 aa14.37□□□□□ -0.11
SNED1-205ENST00000405547 IQCB1Q15051 598 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 TTI1O43156 1089 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 TBC1D1Q86TI0 1168 aaPredicted RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 NRBF2Q96F24 287 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 DHX36Q9H2U1 1008 aaKnown RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 ADCY1Q08828 1119 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 LCMT1Q9UIC8 334 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 SCINQ9Y6U3 715 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 TTC26A0AVF1 554 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 PLS3P13797 630 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 MECOMQ03112 1051 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 ST13P4Q8IZP2 240 aaPredicted RBP14.36□□□□□ -0.11
SNED1-205ENST00000405547 TSC22D3Q99576 134 aa14.36□□□□□ -0.11
SNED1-205ENST00000405547 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms