RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 CREG2Q8IUH2 290 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 KLHL7Q8IXQ5 586 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 TRIM58Q8NG06 486 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 CCT8L2Q96SF2 557 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 RIC8AQ9NPQ8 531 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 SPDYE3A6NKU9 549 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 GLI1P08151 1106 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 CLNS1AP54105 237 aaKnown RBP16.48■□□□□ 0.23
ATG4B-206ENST00000405546 TUBB4BP68371 445 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 ODF2Q5BJF6 829 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 NAIF1Q69YI7 327 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-206ENST00000405546 DNAAF5Q86Y56 855 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 SPAG5Q96R06 1193 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 ERGIC2Q96RQ1 377 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 COA1Q9GZY4 146 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 SLC40A1Q9NP59 571 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 ADAMTS1Q9UHI8 967 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 COL4A3BPQ9Y5P4 624 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 ROBO3Q96MS0 1386 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 MYH10P35580 1976 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 GOLGA8KD6RF30 607 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 FECHP22830 423 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 PEX19P40855 299 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.23
ATG4B-206ENST00000405546 UBXN2AP68543 259 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
ATG4B-206ENST00000405546 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
ATG4B-206ENST00000405546 IQCEQ6IPM2 695 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 B4GALNT4Q76KP1 1039 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 TBC1D5Q92609 795 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 SH3GL2Q99962 352 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 PDIA5Q14554 519 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 SLC9C1Q4G0N8 1177 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 SFMBT2Q5VUG0 894 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 HAS1Q92839 578 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 TSGA10Q9BZW7 698 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 PLAGL2Q9UPG8 496 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
ATG4B-206ENST00000405546 ZNF233A6NK53 670 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 FTCDO95954 541 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 NR1D1P20393 614 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 SHMT1P34896 483 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 CDC37Q16543 378 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-206ENST00000405546 MEA1Q16626 185 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 FAM133AQ8N9E0 248 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 A0A1B0GUL6 1792 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 HGSO14964 777 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-206ENST00000405546 LRRC63Q05C16 580 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 NEDD9Q14511 834 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 TTYH3Q9C0H2 523 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 VEZTQ9HBM0 779 aa16.46■□□□□ 0.23
ATG4B-206ENST00000405546 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.46■□□□□ 0.23
ATG4B-206ENST00000405546 CRKP46108 304 aa16.46■□□□□ 0.22
ATG4B-206ENST00000405546 NLRP14Q86W24 1093 aa16.46■□□□□ 0.22
ATG4B-206ENST00000405546 FAM163AQ96GL9 167 aaPredicted RBP16.46■□□□□ 0.22
ATG4B-206ENST00000405546 ANO3Q9BYT9 981 aa16.46■□□□□ 0.22
ATG4B-206ENST00000405546 ESYT2A0FGR8 921 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 HEXIM1O94992 359 aaKnown RBP16.45■□□□□ 0.22
ATG4B-206ENST00000405546 ICA1Q05084 483 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 KLHL30Q0D2K2 578 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 FAM83BQ5T0W9 1011 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 CCDC121Q6ZUS5 278 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 DDX42Q86XP3 938 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATG4B-206ENST00000405546 OSBPL9Q96SU4 736 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 KRT12Q99456 494 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 NT5C3AQ9H0P0 336 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 GOLPH3Q9H4A6 298 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 STIM2Q9P246 746 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 SALL4Q9UJQ4 1053 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 TARSL2A2RTX5 802 aaKnown RBP16.45■□□□□ 0.22
ATG4B-206ENST00000405546 CHUKO15111 745 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 CETN3O15182 167 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 CLIC2O15247 247 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 NR2F2P24468 414 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 NT5C2P49902 561 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 PLS1Q14651 629 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 CRY2Q49AN0 593 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 BAIAP2L1Q9UHR4 511 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 SNX12Q9UMY4 172 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 PCDHB13Q9Y5F0 798 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 AFF2P51816 1311 aa16.45■□□□□ 0.22
ATG4B-206ENST00000405546 UPP2O95045 317 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 QPCTQ16769 361 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 MYCBPAPQ8TBZ2 947 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 DDX20Q9UHI6 824 aaKnown RBP16.44■□□□□ 0.22
ATG4B-206ENST00000405546 DNM3Q9UQ16 869 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 GAKO14976 1311 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 DDTLA6NHG4 134 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-206ENST00000405546 CFBP00751 764 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 ACTN1P12814 892 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 PSMC6P62333 389 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 EHHADHQ08426 723 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
ATG4B-206ENST00000405546 PKD2L1Q9P0L9 805 aa16.44■□□□□ 0.22
ATG4B-206ENST00000405546 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms