RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 DEFB118Q96PH6 123 aa24.62■■□□□ 1.53
EPCAM-202ENST00000405271 PNMA5Q96PV4 448 aa24.62■■□□□ 1.53
EPCAM-202ENST00000405271 MLXIPQ9HAP2 919 aa24.62■■□□□ 1.53
EPCAM-202ENST00000405271 MAGEF1Q9HAY2 307 aa24.62■■□□□ 1.53
EPCAM-202ENST00000405271 PCDHA10Q9Y5I2 948 aa24.62■■□□□ 1.53
EPCAM-202ENST00000405271 KAT6AQ92794 2004 aa24.62■■□□□ 1.53
EPCAM-202ENST00000405271 ACTN4O43707 911 aaKnown RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 MED24O75448 989 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 ZNF865P0CJ78 1059 aaPredicted RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 ACTR2P61160 394 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 ZRSR1Q15695 479 aaKnown RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 DUSP28Q4G0W2 176 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 KANK3Q6NY19 840 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 CATSPER3Q86XQ3 398 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 DHX37Q8IY37 1157 aaKnown RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 CEP57L1Q8IYX8 460 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 CNNM3Q8NE01 707 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 HSD17B14Q9BPX1 270 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 PANK2Q9BZ23 570 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 HMX1Q9NP08 348 aaPredicted RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 TMEM63CQ9P1W3 806 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 POTEB3A0JP26 581 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 GH1P01241 217 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 P4HBP07237 508 aaKnown RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 PSAPP07602 524 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 SLFN14P0C7P3 912 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 SPATA31C1P0DKV0 1188 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 PRKAR2AP13861 404 aaKnown RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 CCDC144BQ3MJ40 725 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 LONRF3Q496Y0 759 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 MIS18BP1Q6P0N0 1132 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 POTEBQ6S5H4 581 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 ELOA2Q8IYF1 753 aaPredicted RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 EMID1Q96A84 441 aaPredicted RBP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.61■■□□□ 1.53
EPCAM-202ENST00000405271 SERTAD1Q9UHV2 236 aa24.61■■□□□ 1.53
EPCAM-202ENST00000405271 PDE4DIPQ5VU43 2346 aa24.6■■□□□ 1.53
EPCAM-202ENST00000405271 CTAGE5O15320 804 aa24.6■■□□□ 1.53
EPCAM-202ENST00000405271 ATG7O95352 703 aa24.6■■□□□ 1.53
EPCAM-202ENST00000405271 CACNB2Q08289 660 aaPredicted RBP24.6■■□□□ 1.53
EPCAM-202ENST00000405271 PDXDC2PQ6P474 469 aa24.6■■□□□ 1.53
EPCAM-202ENST00000405271 DYDC2Q96IM9 177 aa24.6■■□□□ 1.53
EPCAM-202ENST00000405271 BCAS3Q9H6U6 928 aa24.6■■□□□ 1.53
EPCAM-202ENST00000405271 SUPT20HL2P0C7V6 817 aa24.59■■□□□ 1.53
EPCAM-202ENST00000405271 CYBAP13498 195 aa24.59■■□□□ 1.53
EPCAM-202ENST00000405271 CYP4A11Q02928 519 aa24.59■■□□□ 1.53
EPCAM-202ENST00000405271 ARHGAP1Q07960 439 aa24.59■■□□□ 1.53
EPCAM-202ENST00000405271 LAMC2Q13753 1193 aa24.59■■□□□ 1.53
EPCAM-202ENST00000405271 NAALADL2Q58DX5 795 aa24.59■■□□□ 1.53
EPCAM-202ENST00000405271 LXNQ9BS40 222 aa24.59■■□□□ 1.53
EPCAM-202ENST00000405271 TNMDQ9H2S6 317 aa24.59■■□□□ 1.53
EPCAM-202ENST00000405271 HOOK1Q9UJC3 728 aaKnown RBP24.59■■□□□ 1.53
EPCAM-202ENST00000405271 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.58■■□□□ 1.53
EPCAM-202ENST00000405271 DKC1O60832 514 aaKnown RBP eCLIP24.58■■□□□ 1.53
EPCAM-202ENST00000405271 SLITRK3O94933 977 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 QARSP47897 775 aaKnown RBP24.58■■□□□ 1.53
EPCAM-202ENST00000405271 SP4Q02446 784 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 TNFAIP2Q03169 654 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 ECM1Q16610 540 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 PRAMEF19Q5SWL8 479 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 POTEGQ6S5H5 508 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 ABHD15Q6UXT9 468 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 COPS5Q92905 334 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 PLIN2Q99541 437 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 RGL1Q9NZL6 768 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 FAM184BQ9ULE4 1060 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 KIAA1024Q9UPX6 916 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 IGSF9BQ9UPX0 1349 aa24.58■■□□□ 1.53
EPCAM-202ENST00000405271 NOP56O00567 594 aaKnown RBP24.57■■□□□ 1.52
EPCAM-202ENST00000405271 SORBS3O60504 671 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 TFRCP02786 760 aaKnown RBP24.57■■□□□ 1.52
EPCAM-202ENST00000405271 AKR1A1P14550 325 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 SMPD1P17405 629 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 PSMC5P62195 406 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 CTTNQ14247 550 aaKnown RBP24.57■■□□□ 1.52
EPCAM-202ENST00000405271 BANK1Q8NDB2 785 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 SEPT1Q8WYJ6 367 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 LARP4BQ92615 738 aaKnown RBP24.57■■□□□ 1.52
EPCAM-202ENST00000405271 ATP6V0A1Q93050 837 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 SPATA33Q96N06 139 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 CRISPLD2Q9H0B8 497 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 ZSWIM4Q9H7M6 989 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 BLOC1S4Q9NUP1 217 aa24.57■■□□□ 1.52
EPCAM-202ENST00000405271 LYPLA2O95372 231 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 TPH2Q8IWU9 490 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 RAD54LQ92698 747 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 GPR20Q99678 358 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 IGKV6D-21A0A0A0MT36 114 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 GSTTP1A0A1W2PQM5 241 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 SH3RF1Q7Z6J0 888 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 UBE2Q1Q7Z7E8 422 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 C4orf19Q8IY42 314 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 PPTC7Q8NI37 304 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 GNEQ9Y223 722 aaKnown RBP24.56■■□□□ 1.52
EPCAM-202ENST00000405271 Q9Y3F1 56 aa24.56■■□□□ 1.52
EPCAM-202ENST00000405271 EMSYQ7Z589 1322 aa24.55■■□□□ 1.52
EPCAM-202ENST00000405271 LETM1O95202 739 aaPredicted RBP24.55■■□□□ 1.52
EPCAM-202ENST00000405271 HSDL1Q3SXM5 330 aa24.55■■□□□ 1.52
EPCAM-202ENST00000405271 TMEM63BQ5T3F8 832 aa24.55■■□□□ 1.52
EPCAM-202ENST00000405271 RBM43Q6ZSC3 357 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms