RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 NGLY1Q96IV0 654 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 C8orf37Q96NL8 207 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 RBM12Q9NTZ6 932 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 USP40Q9NVE5 1235 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 DMAC2Q9NW81 257 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 LCMT1Q9UIC8 334 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 BZW2Q9Y6E2 419 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 NCANO14594 1321 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 RLFQ13129 1914 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 A0A087X0T9 212 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 NPHP3-ACAD11A0A0J9YXS1 232 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 H0YGN5 161 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 PLA2G6O60733 806 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 FAM228BP0C875 321 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 NPR1P16066 1061 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 KLRC1P26715 233 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 PON1P27169 355 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 HSPA9P38646 679 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 POU5F1Q01860 360 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 APBA1Q02410 837 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 GHRHRQ02643 423 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 RASSF7Q02833 373 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 KNOP1Q1ED39 458 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 FOXR1Q6PIV2 292 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 GBP6Q6ZN66 633 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 CLEC10AQ8IUN9 316 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 EEF2KMTQ96G04 330 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 CDK5RAP3Q96JB5 506 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 CAPZA3Q96KX2 299 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 HSD17B14Q9BPX1 270 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 LSM14BQ9BX40 385 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 GPR88Q9GZN0 384 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 MMRN2Q9H8L6 949 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 KANSL2Q9H9L4 492 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 CWC15Q9P013 229 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 KIAA1024Q9UPX6 916 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 NFS1Q9Y697 457 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 DOCK5Q9H7D0 1870 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 POTEB3A0JP26 581 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 A6NNZ2 444 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 POTECB2RU33 542 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 FAM86B1E9PN63 330 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 TGFB1I1O43294 461 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 NCK2O43639 380 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 PALMO75781 387 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 IPO7O95373 1038 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 EYA4O95677 639 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 FOSP01100 380 aaPredicted RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 GLI1P08151 1106 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 FAM86B2P0C5J1 330 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 EEF2P13639 858 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 LMAN1P49257 510 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 HADHBP55084 474 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 PSMC6P62333 389 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 KCNH2Q12809 1159 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 NFIAQ12857 509 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 PPP2R5CQ13362 524 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 TUBB8Q3ZCM7 444 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 CFAP221Q4G0U5 840 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 POTEBQ6S5H4 581 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 ZNF571Q7Z3V5 609 aaPredicted RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 GPBP1Q86WP2 473 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 USP38Q8NB14 1042 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 GJA10Q969M2 543 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 CALR3Q96L12 384 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 JADE2Q9NQC1 790 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 KCNQ5Q9NR82 932 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 AJAP1Q9UKB5 411 aaPredicted RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 PHIPQ8WWQ0 1821 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 A0A0G2JS52 829 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TRAF5O00463 557 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 MSH4O15457 936 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PPP1R37O75864 691 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 HMGB2P26583 209 aaKnown RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 CRKP46108 304 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TNNI2P48788 182 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 CORO7P57737 925 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 ARHGAP4P98171 946 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PPFIA1Q13136 1202 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 ADAM9Q13443 819 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 SPDYCQ5MJ68 293 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 DACT2Q5SW24 774 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 C1orf186Q6ZWK4 172 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 KCTD1Q719H9 257 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PODNQ7Z5L7 613 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 GSPT2Q8IYD1 628 aaKnown RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 SLC5A5Q92911 643 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TEKT1Q969V4 418 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 SLC35C1Q96A29 364 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 PBKQ96KB5 322 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 REEP2Q9BRK0 252 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TXLNGYQ9BZA5 131 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TUFT1Q9NNX1 390 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 TYW1Q9NV66 732 aaKnown RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 SERPINA10Q9UK55 444 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.24□□□□□ -1.73
RTN4-209ENST00000405240 DDTLA6NHG4 134 aaPredicted RBP4.24□□□□□ -1.73
RTN4-209ENST00000405240 ZNF233A6NK53 670 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L15C9J2P7 530 aa4.24□□□□□ -1.73
RTN4-209ENST00000405240 USP17L13C9JLJ4 530 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms