RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
ATG4B-205ENST00000404914 NR2E1Q9Y466 385 aa17■□□□□ 0.31
ATG4B-205ENST00000404914 ABCB11O95342 1321 aa17■□□□□ 0.31
ATG4B-205ENST00000404914 TTI1O43156 1089 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 UBAP2Q5T6F2 1119 aaKnown RBP16.99■□□□□ 0.31
ATG4B-205ENST00000404914 ZNF571Q7Z3V5 609 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-205ENST00000404914 CACNA2D3Q8IZS8 1091 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 TRIM31Q9BZY9 425 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 MINPP1Q9UNW1 487 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 CAMTA2O94983 1202 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 CAVIN4Q5BKX8 364 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 USP17L2Q6R6M4 530 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 RAD54LQ92698 747 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 TAF4BQ92750 862 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 CELF1Q92879 486 aaKnown RBP16.99■□□□□ 0.31
ATG4B-205ENST00000404914 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 MTMR9Q96QG7 549 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 MTFR1LQ9H019 292 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 ATP8A2Q9NTI2 1148 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-205ENST00000404914 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
ATG4B-205ENST00000404914 PPP1R12BO60237 982 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-205ENST00000404914 RPSAP08865 295 aaKnown RBP16.99■□□□□ 0.31
ATG4B-205ENST00000404914 PAX7P23759 505 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 USP11P51784 963 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 SBK1Q52WX2 424 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 KRT25Q7Z3Z0 450 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 TMC3Q7Z5M5 1100 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 LRRC57Q8N9N7 239 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 TRIM51Q9BSJ1 452 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 EDEM3Q9BZQ6 932 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 GANQ9H2C0 597 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 VEZTQ9HBM0 779 aa16.99■□□□□ 0.31
ATG4B-205ENST00000404914 NPHP3-ACAD11A0A0J9YXS1 232 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 COPB2P35606 906 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 COASYQ13057 564 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 KRT71Q3SY84 523 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 C12orf60Q5U649 245 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 DNAJC19Q96DA6 116 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 PNMA2Q9UL42 364 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 TAF1LQ8IZX4 1826 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 SHBGP04278 402 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 CUL1Q13616 776 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 UBE4AQ14139 1066 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 MYOCDQ8IZQ8 938 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 PROM2Q8N271 834 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 TBC1D31Q96DN5 1066 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 PIGSQ96S52 555 aa16.98■□□□□ 0.31
ATG4B-205ENST00000404914 F8VZ95 297 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 PAEPP09466 180 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 DHX9Q08211 1270 aaKnown RBP16.97■□□□□ 0.31
ATG4B-205ENST00000404914 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 TLDC1Q6P9B6 456 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 RPAINQ86UA6 219 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 SNX29Q8TEQ0 813 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 SYN2Q92777 582 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-205ENST00000404914 AJAP1Q9UKB5 411 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-205ENST00000404914 CCDC189A1A4V9 331 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 CAND2O75155 1236 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 FGFR1OPO95684 399 aaKnown RBP16.97■□□□□ 0.31
ATG4B-205ENST00000404914 TSPY3P0CV98 308 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 TSPY8P0CW00 308 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 SLC9A1P19634 815 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 XRCC4Q13426 336 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 ASIC2Q16515 512 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 CALCRLQ16602 461 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 ERFEQ4G0M1 354 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 LACTB2Q53H82 288 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-205ENST00000404914 IRF2BP2Q7Z5L9 587 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 CPLX4Q7Z7G2 160 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 AMIGO3Q86WK7 504 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 TRIM59Q8IWR1 403 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 LRRC45Q96CN5 670 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 CDK5RAP3Q96JB5 506 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 UBA5Q9GZZ9 404 aa16.97■□□□□ 0.31
ATG4B-205ENST00000404914 TMCO5BA8MYB1 307 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 KRIT1O00522 736 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 KIF1CO43896 1103 aaKnown RBP16.96■□□□□ 0.31
ATG4B-205ENST00000404914 ELF3P78545 371 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-205ENST00000404914 FKBP3Q00688 224 aaKnown RBP16.96■□□□□ 0.31
ATG4B-205ENST00000404914 BIRC3Q13489 604 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 DPY19L2P1Q6NXN4 242 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 TSG101Q99816 390 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 MKNK2Q9HBH9 465 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.96■□□□□ 0.314e-14■■□□□ 13.9
ATG4B-205ENST00000404914 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-205ENST00000404914 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
ATG4B-205ENST00000404914 FBXO33Q7Z6M2 555 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 ACTRT1Q8TDG2 376 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 SH3RF3Q8TEJ3 882 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-205ENST00000404914 FAXDC2Q96IV6 333 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 AIPL1Q9NZN9 384 aa16.96■□□□□ 0.31
ATG4B-205ENST00000404914 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATG4B-205ENST00000404914 MGRN1O60291 552 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 APBA3O96018 575 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 GNAQP50148 359 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms