RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 A0A087X0T9 212 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 PALMO75781 387 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 FAM228BP0C875 321 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 EPHB4P54760 987 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 ADAM9Q13443 819 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 RAPGEF1Q13905 1077 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 DOK7Q18PE1 504 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 SWT1Q5T5J6 900 aaKnown RBP17.24■□□□□ 0.35
TOM1-203ENST00000404284 MOXD1Q6UVY6 613 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 TEKT1Q969V4 418 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
TOM1-203ENST00000404284 BCCIPQ9P287 314 aaKnown RBP eCLIP17.24■□□□□ 0.35
TOM1-203ENST00000404284 PCDHGC5Q9Y5F6 944 aa17.24■□□□□ 0.35
TOM1-203ENST00000404284 EEF2P13639 858 aaKnown RBP17.23■□□□□ 0.35
TOM1-203ENST00000404284 MAP2K2P36507 400 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 NAP1L1P55209 391 aaKnown RBP17.23■□□□□ 0.35
TOM1-203ENST00000404284 DPY19L2P1Q6NXN4 242 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 C8orf74Q6P047 294 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 SLFN12Q8IYM2 578 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 FAM133AQ8N9E0 248 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 GJD4Q96KN9 370 aaPredicted RBP17.23■□□□□ 0.35
TOM1-203ENST00000404284 KIF13BQ9NQT8 1826 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 FAM196BA6NMK8 535 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 KCNH2Q12809 1159 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 CFAP221Q4G0U5 840 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 EMBQ6PCB8 327 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 CATSPER3Q86XQ3 398 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 DCAF4Q8WV16 495 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 MKL1Q969V6 931 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 SH3GL2Q99962 352 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 PACSIN1Q9BY11 444 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 LUC7LQ9NQ29 371 aaKnown RBP17.23■□□□□ 0.35
TOM1-203ENST00000404284 RNF14Q9UBS8 474 aa17.23■□□□□ 0.35
TOM1-203ENST00000404284 EP400Q96L91 3159 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 FTCDO95954 541 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 NR2F2P24468 414 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 ARHGAP4P98171 946 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 KLHL30Q0D2K2 578 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 AP3B2Q13367 1082 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 TSEN2Q8NCE0 465 aaKnown RBP17.22■□□□□ 0.35
TOM1-203ENST00000404284 CAVIN3Q969G5 261 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 CETN3O15182 167 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 SHOX2O60902 331 aaPredicted RBP17.22■□□□□ 0.35
TOM1-203ENST00000404284 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
TOM1-203ENST00000404284 PSMC6P62333 389 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 ARID5AQ03989 594 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 GIT2Q14161 759 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 SKIDA1Q1XH10 827 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 GLE1Q53GS7 698 aaKnown RBP17.22■□□□□ 0.35
TOM1-203ENST00000404284 LENG9Q96B70 501 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 NYAP2Q9P242 653 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 ADAMTS1Q9UHI8 967 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 TRAF3IP3Q9Y228 551 aa17.22■□□□□ 0.35
TOM1-203ENST00000404284 GOLGA6CA6NDK9 693 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 RAD21O60216 631 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 GOLGA6DP0CG33 693 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 SPATA31C1P0DKV0 1188 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 HOXD13P35453 343 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 ASIC2Q16515 512 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 MEI1Q5TIA1 1274 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 MICALL1Q8N3F8 863 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 FAM76AQ8TAV0 307 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 INPP4AQ96PE3 977 aaPredicted RBP17.21■□□□□ 0.35
TOM1-203ENST00000404284 ZHX3Q9H4I2 956 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 GOLGA6AQ9NYA3 693 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 CRKP46108 304 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 KIAA0753Q2KHM9 967 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 PRR16Q569H4 304 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 EPM2AIP1Q7L775 607 aaPredicted RBP17.21■□□□□ 0.35
TOM1-203ENST00000404284 SIAH1Q8IUQ4 282 aa17.21■□□□□ 0.35
TOM1-203ENST00000404284 GRID2IPA4D2P6 1211 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 GLI1P08151 1106 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 ACTN1P12814 892 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 EPS15P42566 896 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 CACNB3P54284 484 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 PABPC4Q13310 644 aaKnown RBP eCLIP17.2■□□□□ 0.343e-6■□□□□ 9
TOM1-203ENST00000404284 SFR1Q86XK3 245 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 REEP2Q9BRK0 252 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.2■□□□□ 0.34
TOM1-203ENST00000404284 GDF3Q9NR23 364 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 PCDHAC2Q9Y5I4 1007 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 DDTLA6NHG4 134 aaPredicted RBP17.2■□□□□ 0.34
TOM1-203ENST00000404284 MEIS1O00470 390 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 TBX3O15119 743 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 RPA1P27694 616 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 ENOX2Q16206 610 aaKnown RBP17.2■□□□□ 0.34
TOM1-203ENST00000404284 Q4G0T1 1027 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 SYT2Q8N9I0 419 aaPredicted RBP17.2■□□□□ 0.34
TOM1-203ENST00000404284 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
TOM1-203ENST00000404284 PACSIN2Q9UNF0 486 aaPredicted RBP17.2■□□□□ 0.34
TOM1-203ENST00000404284 DNA2P51530 1060 aa17.19■□□□□ 0.34
TOM1-203ENST00000404284 KNOP1Q1ED39 458 aaKnown RBP17.19■□□□□ 0.34
TOM1-203ENST00000404284 IRF2BP2Q7Z5L9 587 aa17.19■□□□□ 0.34
TOM1-203ENST00000404284 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
TOM1-203ENST00000404284 ZDHHC15Q96MV8 337 aa17.19■□□□□ 0.34
TOM1-203ENST00000404284 PLCB1Q9NQ66 1216 aa17.19■□□□□ 0.34
TOM1-203ENST00000404284 ZSCAN5CA6NGD5 496 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms