RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 RTEL1Q9NZ71 1219 aa20.57■□□□□ 0.88
HDAC11-204ENST00000404040 GRM6O15303 877 aa20.56■□□□□ 0.88
HDAC11-204ENST00000404040 BMPR1AP36894 532 aa20.56■□□□□ 0.88
HDAC11-204ENST00000404040 WTAPQ15007 396 aa20.56■□□□□ 0.88
HDAC11-204ENST00000404040 PCNX4Q63HM2 1172 aa20.56■□□□□ 0.88
HDAC11-204ENST00000404040 TAF2Q6P1X5 1199 aa20.56■□□□□ 0.88
HDAC11-204ENST00000404040 RUFY4Q6ZNE9 571 aa20.56■□□□□ 0.88
HDAC11-204ENST00000404040 CLP1Q92989 425 aaKnown RBP20.56■□□□□ 0.88
HDAC11-204ENST00000404040 IRS1P35568 1242 aa20.55■□□□□ 0.88
HDAC11-204ENST00000404040 MGAT3Q09327 533 aa20.55■□□□□ 0.88
HDAC11-204ENST00000404040 HYAL1Q12794 435 aa20.55■□□□□ 0.88
HDAC11-204ENST00000404040 LPIN1Q14693 890 aa20.55■□□□□ 0.88
HDAC11-204ENST00000404040 SMAD2Q15796 467 aaKnown RBP20.55■□□□□ 0.88
HDAC11-204ENST00000404040 ADCK5Q3MIX3 580 aa20.55■□□□□ 0.88
HDAC11-204ENST00000404040 XRRA1Q6P2D8 792 aa20.55■□□□□ 0.88
HDAC11-204ENST00000404040 BACH2Q9BYV9 841 aa20.55■□□□□ 0.88
HDAC11-204ENST00000404040 KCNH6Q9H252 994 aa20.55■□□□□ 0.88
HDAC11-204ENST00000404040 FNDC1Q4ZHG4 1894 aaPredicted RBP20.55■□□□□ 0.88
HDAC11-204ENST00000404040 KMT2EQ8IZD2 1858 aa20.54■□□□□ 0.88
HDAC11-204ENST00000404040 TBX10O75333 385 aa20.54■□□□□ 0.88
HDAC11-204ENST00000404040 MMP1P03956 469 aa20.54■□□□□ 0.88
HDAC11-204ENST00000404040 NHLH1Q02575 133 aa20.54■□□□□ 0.88
HDAC11-204ENST00000404040 DLX2Q07687 328 aaPredicted RBP20.54■□□□□ 0.88
HDAC11-204ENST00000404040 CLUL1Q15846 466 aa20.54■□□□□ 0.88
HDAC11-204ENST00000404040 SMARCC2Q8TAQ2 1214 aa20.54■□□□□ 0.88
HDAC11-204ENST00000404040 POP1Q99575 1024 aaKnown RBP20.54■□□□□ 0.88
HDAC11-204ENST00000404040 C22orf23Q9BZE7 217 aa20.54■□□□□ 0.88
HDAC11-204ENST00000404040 UPF3BQ9BZI7 483 aaKnown RBP20.54■□□□□ 0.88
HDAC11-204ENST00000404040 CYP46A1Q9Y6A2 500 aa20.54■□□□□ 0.88
HDAC11-204ENST00000404040 EVPLQ92817 2033 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 PIK3CDO00329 1044 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 MBTPS2O43462 519 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 TCF7P36402 384 aaPredicted RBP20.53■□□□□ 0.88
HDAC11-204ENST00000404040 LIFRP42702 1097 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 MRE11P49959 708 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 ANTXR2P58335 489 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 FGD1P98174 961 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 PPFIA1Q13136 1202 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 SMAD4Q13485 552 aaKnown RBP20.53■□□□□ 0.88
HDAC11-204ENST00000404040 USP17L6PQ6QN14 398 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 GIMAP8Q8ND71 665 aaPredicted RBP20.53■□□□□ 0.88
HDAC11-204ENST00000404040 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 ZNF689Q96CS4 500 aaPredicted RBP20.53■□□□□ 0.88
HDAC11-204ENST00000404040 FBXL18Q96ME1 805 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 TUBE1Q9UJT0 475 aa20.53■□□□□ 0.88
HDAC11-204ENST00000404040 MBLAC1A4D2B0 266 aaPredicted RBP20.52■□□□□ 0.88
HDAC11-204ENST00000404040 RPS6KB1P23443 525 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 RBM25P49756 843 aaKnown RBP20.52■□□□□ 0.88
HDAC11-204ENST00000404040 EXOSC10Q01780 885 aaKnown RBP20.52■□□□□ 0.88
HDAC11-204ENST00000404040 BTG3Q14201 252 aaPredicted RBP20.52■□□□□ 0.88
HDAC11-204ENST00000404040 FBXO47Q5MNV8 452 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 HFE2Q6ZVN8 426 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 RUFY3Q7L099 469 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 CATIPQ7Z7H3 387 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 RSPH3Q86UC2 560 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 NLRX1Q86UT6 975 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 IGDCC4Q8TDY8 1250 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 CUL5Q93034 780 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 PLVAPQ9BX97 442 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 SPZ1Q9BXG8 430 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 ZSWIM6Q9HCJ5 1215 aa20.52■□□□□ 0.88
HDAC11-204ENST00000404040 CACNA1HO95180 2353 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 CCDC69A6NI79 296 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 SH2B2O14492 632 aaPredicted RBP20.51■□□□□ 0.87
HDAC11-204ENST00000404040 ENPP3O14638 875 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 MEIS2O14770 477 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 DGKIO75912 1065 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 KCNA2P16389 499 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 GTF2F1P35269 517 aaKnown RBP eCLIP20.51■□□□□ 0.87
HDAC11-204ENST00000404040 GRIK4Q16099 956 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 HERC4Q5GLZ8 1057 aaPredicted RBP20.51■□□□□ 0.87
HDAC11-204ENST00000404040 NFXL1Q6ZNB6 911 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 TSHZ1Q6ZSZ6 1077 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 FBXL16Q8N461 479 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 LINC01599Q8WXQ3 324 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 GPRASP2Q96D09 838 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 ERAP1Q9NZ08 941 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 MUTYHQ9UIF7 546 aa20.51■□□□□ 0.87
HDAC11-204ENST00000404040 CSPG5O95196 566 aa20.5■□□□□ 0.87
HDAC11-204ENST00000404040 MARK3P27448 753 aa20.5■□□□□ 0.87
HDAC11-204ENST00000404040 MARCH8Q5T0T0 291 aa20.5■□□□□ 0.87
HDAC11-204ENST00000404040 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
HDAC11-204ENST00000404040 DNAJB3Q8WWF6 145 aa20.5■□□□□ 0.87
HDAC11-204ENST00000404040 RRP36Q96EU6 259 aaKnown RBP20.5■□□□□ 0.87
HDAC11-204ENST00000404040 LY9Q9HBG7 655 aa20.5■□□□□ 0.87
HDAC11-204ENST00000404040 CD207Q9UJ71 328 aa20.5■□□□□ 0.87
HDAC11-204ENST00000404040 CDY2AQ9Y6F7 541 aa20.5■□□□□ 0.87
HDAC11-204ENST00000404040 MYH9P35579 1960 aaKnown RBP20.5■□□□□ 0.87
HDAC11-204ENST00000404040 WDR81Q562E7 1941 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 GSTTP1A0A1W2PQM5 241 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 LINC01565O15544 149 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 ATP9AO75110 1047 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 CALM1P0DP23 149 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 CALM2P0DP24 149 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 CALM3P0DP25 149 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 MRPS6P82932 125 aaKnown RBP20.49■□□□□ 0.87
HDAC11-204ENST00000404040 CAMK1Q14012 370 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 SGMS1Q86VZ5 419 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 P2RX5Q93086 422 aa20.49■□□□□ 0.87
HDAC11-204ENST00000404040 CDHR1Q96JP9 859 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms