RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 CST5P28325 142 aaPredicted RBP37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 KCNA10Q16322 511 aa37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 UGCGQ16739 394 aa37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 KRT79Q5XKE5 535 aa37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 ZNF302Q9NR11 478 aa37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 OGDHLQ9ULD0 1010 aa37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 LGR5O75473 907 aa37.35■■■■□ 3.57
CSNK1E-204ENST00000403904 SLITRK3O94933 977 aa37.35■■■■□ 3.57
CSNK1E-204ENST00000403904 UBA7P41226 1012 aa37.35■■■■□ 3.57
CSNK1E-204ENST00000403904 CTTNQ14247 550 aaKnown RBP37.35■■■■□ 3.57
CSNK1E-204ENST00000403904 CCSAPQ6IQ19 270 aaPredicted RBP37.35■■■■□ 3.57
CSNK1E-204ENST00000403904 ARRDC4Q8NCT1 418 aa37.35■■■■□ 3.57
CSNK1E-204ENST00000403904 GLG1Q92896 1179 aa37.35■■■■□ 3.57
CSNK1E-204ENST00000403904 AZI2Q9H6S1 392 aa37.35■■■■□ 3.57
CSNK1E-204ENST00000403904 MED24O75448 989 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 P4HBP07237 508 aaKnown RBP37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 CCT6AP40227 531 aaKnown RBP37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 STAT5BP51692 787 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 HAUS3Q68CZ6 603 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 CABP7Q86V35 215 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 CATSPER3Q86XQ3 398 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 TMEM87AQ8NBN3 555 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 C16orf70Q9BSU1 422 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 EMSYQ7Z589 1322 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 ZEB2O60315 1214 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 SPATA31C1P0DKV0 1188 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 ZRSR1Q15695 479 aaKnown RBP37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 TPH2Q8IWU9 490 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 LXNQ9BS40 222 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 TMEM106CQ9BVX2 250 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 CRISPLD2Q9H0B8 497 aa37.34■■■■□ 3.57
CSNK1E-204ENST00000403904 KIAA0100Q14667 2235 aaKnown RBP37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 TFRCP02786 760 aaKnown RBP37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 ASGR1P07306 291 aa37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 RPA1P27694 616 aa37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 QARSP47897 775 aaKnown RBP37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 PURAQ00577 322 aaKnown RBP37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 FAM160B1Q5W0V3 765 aa37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 PCSK9Q8NBP7 692 aaKnown RBP37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 POLR3CQ9BUI4 534 aaPredicted RBP37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 WRAP73Q9P2S5 460 aaPredicted RBP37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 MAFBQ9Y5Q3 323 aaPredicted RBP37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 STK24Q9Y6E0 443 aa37.33■■■■□ 3.57
CSNK1E-204ENST00000403904 PRPF40AO75400 957 aaKnown RBP37.32■■■■□ 3.56
CSNK1E-204ENST00000403904 ECM1Q16610 540 aa37.32■■■■□ 3.56
CSNK1E-204ENST00000403904 PDXDC2PQ6P474 469 aa37.32■■■■□ 3.56
CSNK1E-204ENST00000403904 NEK9Q8TD19 979 aa37.32■■■■□ 3.56
CSNK1E-204ENST00000403904 AFAP1L1Q8TED9 768 aa37.32■■■■□ 3.56
CSNK1E-204ENST00000403904 SMARCAD1Q9H4L7 1026 aa37.32■■■■□ 3.56
CSNK1E-204ENST00000403904 IGSF9BQ9UPX0 1349 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 POTEB3A0JP26 581 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 GOLGA6L4A6NEF3 574 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 GJA8P48165 433 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 PSMC5P62195 406 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 RESP18Q5W5W9 173 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 POTEBQ6S5H4 581 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 CXCL17Q6UXB2 119 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 TRMT1LQ7Z2T5 733 aaKnown RBP37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 ATP6V0A1Q93050 837 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 TUFT1Q9NNX1 390 aa37.31■■■■□ 3.56
CSNK1E-204ENST00000403904 KPNA6O60684 536 aa37.3■■■■□ 3.56
CSNK1E-204ENST00000403904 PLPPR4Q7Z2D5 763 aa37.3■■■■□ 3.56
CSNK1E-204ENST00000403904 CCSER1Q9C0I3 900 aa37.3■■■■□ 3.56
CSNK1E-204ENST00000403904 H3BRB1 525 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 ZNF862O60290 1169 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 GADD45BO75293 160 aaPredicted RBP37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 CMA1P23946 247 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 MARK3P27448 753 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 KARSQ15046 597 aaKnown RBP37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 KAT2BQ92831 832 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 PLIN2Q99541 437 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 TUT1Q9H6E5 874 aaKnown RBP37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 ZSWIM4Q9H7M6 989 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 ATP4AP20648 1035 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 TXLNAP40222 546 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 POTEGQ6S5H5 508 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 PANK2Q9BZ23 570 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 ERAP1Q9NZ08 941 aa37.29■■■■□ 3.56
CSNK1E-204ENST00000403904 A0A1W2PQ27 194 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 A0A1W2PQ64 194 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 A0A1W2PQD8 194 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 KBTBD13C9JR72 458 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 F2P00734 622 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 ACLYP53396 1101 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 CKAP2LQ8IYA6 745 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 RASSF8Q8NHQ8 419 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 PNMA5Q96PV4 448 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 TSEN34Q9BSV6 310 aaKnown RBP37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 ZNF215Q9UL58 517 aaPredicted RBP37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 KIAA1024Q9UPX6 916 aa37.28■■■■□ 3.56
CSNK1E-204ENST00000403904 A0A087WWV3 80 aa37.27■■■■□ 3.56
CSNK1E-204ENST00000403904 DNM1LO00429 736 aa37.27■■■■□ 3.56
CSNK1E-204ENST00000403904 CHMP4BP1P59074 171 aa37.27■■■■□ 3.56
CSNK1E-204ENST00000403904 GRB10Q13322 594 aa37.27■■■■□ 3.56
CSNK1E-204ENST00000403904 CALML4Q96GE6 196 aa37.27■■■■□ 3.56
CSNK1E-204ENST00000403904 CDK5RAP3Q96JB5 506 aa37.27■■■■□ 3.56
CSNK1E-204ENST00000403904 MTG1Q9BT17 334 aaPredicted RBP37.27■■■■□ 3.56
CSNK1E-204ENST00000403904 FAM13BQ9NYF5 915 aa37.27■■■■□ 3.56
CSNK1E-204ENST00000403904 A0A1B0GVL5 298 aa37.26■■■■□ 3.56
CSNK1E-204ENST00000403904 MOXD2PA6NHM9 499 aa37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms