RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MS4A14Q96JA4 679 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 ZIM3Q96PE6 472 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 ADCY7P51828 1080 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 FAM83BQ5T0W9 1011 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 KCNK18Q7Z418 384 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 GLIS3Q8NEA6 775 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 DNAJC19Q96DA6 116 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 NUDT12Q9BQG2 462 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 EHD4Q9H223 541 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 GLI1P08151 1106 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 COASYQ13057 564 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 LRRC41Q15345 812 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 GPIHBP1Q8IV16 184 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 IQCKQ8N0W5 287 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 CEP63Q96MT8 703 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 NLRC4Q9NPP4 1024 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 PCDHGC5Q9Y5F6 944 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 FAM169AQ9Y6X4 670 aa21.8■■□□□ 1.08
CCDC47-202ENST00000403162 SBF1O95248 1867 aa21.79■■□□□ 1.08
CCDC47-202ENST00000403162 USP17L5A8MUK1 530 aa21.79■■□□□ 1.08
CCDC47-202ENST00000403162 NAP1L1P55209 391 aaKnown RBP21.79■■□□□ 1.08
CCDC47-202ENST00000403162 MARSP56192 900 aaKnown RBP21.79■■□□□ 1.08
CCDC47-202ENST00000403162 PICALMQ13492 652 aa21.79■■□□□ 1.08
CCDC47-202ENST00000403162 PALMO75781 387 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 GNA14O95837 355 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 RPS12P25398 132 aaKnown RBP21.78■■□□□ 1.08
CCDC47-202ENST00000403162 GMPSP49915 693 aaPredicted RBP21.78■■□□□ 1.08
CCDC47-202ENST00000403162 DLGAP5Q15398 846 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 CCDC40Q4G0X9 1142 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 PPP4R3AQ6IN85 833 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 CD302Q8IX05 232 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 UBA5Q9GZZ9 404 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 HEXIM1O94992 359 aaKnown RBP21.78■■□□□ 1.08
CCDC47-202ENST00000403162 PDHBP11177 359 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 CARSP49589 748 aaKnown RBP21.78■■□□□ 1.08
CCDC47-202ENST00000403162 SLC18A3Q16572 532 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 SKIDA1Q1XH10 827 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 MEI1Q5TIA1 1274 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 EMC10Q5UCC4 262 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 C9orf131Q5VYM1 1079 aa21.78■■□□□ 1.08
CCDC47-202ENST00000403162 PRMT6Q96LA8 375 aaPredicted RBP21.78■■□□□ 1.08
CCDC47-202ENST00000403162 LSM14BQ9BX40 385 aaKnown RBP21.78■■□□□ 1.08
CCDC47-202ENST00000403162 DICER1Q9UPY3 1922 aaKnown RBP21.77■■□□□ 1.08
CCDC47-202ENST00000403162 ATXN2Q99700 1313 aaKnown RBP21.77■■□□□ 1.08
CCDC47-202ENST00000403162 TRAF5O00463 557 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 ERCC3P19447 782 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 FAM26FQ5R3K3 315 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 CFAP58Q5T655 872 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 ICE2Q659A1 982 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 TRIM59Q8IWR1 403 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 C1orf131Q8NDD1 294 aaKnown RBP21.77■■□□□ 1.08
CCDC47-202ENST00000403162 INPP4AQ96PE3 977 aaPredicted RBP21.77■■□□□ 1.08
CCDC47-202ENST00000403162 TDRD3Q9H7E2 651 aaKnown RBP21.77■■□□□ 1.08
CCDC47-202ENST00000403162 EPB41L5Q9HCM4 733 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 NFU1Q9UMS0 254 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 PLIN4Q96Q06 1357 aa21.77■■□□□ 1.08
CCDC47-202ENST00000403162 ASPRV1Q53RT3 343 aa21.77■■□□□ 1.07
CCDC47-202ENST00000403162 PPP1R18Q6NYC8 613 aa21.77■■□□□ 1.07
CCDC47-202ENST00000403162 KDM7AQ6ZMT4 941 aa21.77■■□□□ 1.07
CCDC47-202ENST00000403162 COA7Q96BR5 231 aa21.77■■□□□ 1.07
CCDC47-202ENST00000403162 CCDC43Q96MW1 224 aaKnown RBP21.77■■□□□ 1.07
CCDC47-202ENST00000403162 PANK4Q9NVE7 773 aa21.77■■□□□ 1.07
CCDC47-202ENST00000403162 SPDYE2BA6NHP3 402 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 ZEB2O60315 1214 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 SPDYE6P0CI01 402 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 KLRC1P26715 233 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 CACNB3P54284 484 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 POLR2FP61218 127 aaKnown RBP21.76■■□□□ 1.07
CCDC47-202ENST00000403162 GUCY2DQ02846 1103 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 ECM1Q16610 540 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 HYIQ5T013 277 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 WHAMMQ8TF30 809 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 DDX4Q9NQI0 724 aaKnown RBP21.76■■□□□ 1.07
CCDC47-202ENST00000403162 AIPL1Q9NZN9 384 aa21.76■■□□□ 1.07
CCDC47-202ENST00000403162 ZNF233A6NK53 670 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 CES2O00748 559 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 GRIN3BO60391 1043 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 FAM153BP0C7A2 387 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 FAM153CQ494X1 144 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 MICALL1Q8N3F8 863 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 FAM153AQ9UHL3 310 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 BTNL10A8MVZ5 291 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 FTCDO95954 541 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 KRT14P02533 472 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 NFIAQ12857 509 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 CDC37Q16543 378 aaPredicted RBP21.75■■□□□ 1.07
CCDC47-202ENST00000403162 MICALL2Q8IY33 904 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 PIK3R5Q8WYR1 880 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 TBC1D5Q92609 795 aa21.75■■□□□ 1.07
CCDC47-202ENST00000403162 ERLIN2O94905 339 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 PDCLQ13371 301 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 ZC3H3Q8IXZ2 948 aaKnown RBP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 MYOZ2Q9NPC6 264 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 BMP2KQ9NSY1 1161 aaPredicted RBP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 FRMPD2Q68DX3 1309 aaPredicted RBP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 KDM3AQ9Y4C1 1321 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 FOCADQ5VW36 1801 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 ZSCAN5CA6NGD5 496 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms