RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 COG2Q14746 738 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 MEA1Q16626 185 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 KCTD16Q68DU8 428 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 C8orf74Q6P047 294 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 FOXR1Q6PIV2 292 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 LEKR1Q6ZMV7 388 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 CCDC170Q8IYT3 715 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 NLGN1Q8N2Q7 840 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 MASTLQ96GX5 879 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 OSBPL9Q96SU4 736 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 RUFY1Q96T51 708 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 NT5C3AQ9H0P0 336 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 SH2D4AQ9H788 454 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 TMOD2Q9NZR1 351 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 MYO1AQ9UBC5 1043 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 ARMCX3Q9UH62 379 aaPredicted RBP4.8□□□□□ -1.64
SMC6-203ENST00000402989 CHORDC1Q9UHD1 332 aaPredicted RBP4.8□□□□□ -1.64
SMC6-203ENST00000402989 RSPH14Q9UHP6 348 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 L1RE1Q9UN81 338 aa4.8□□□□□ -1.64
SMC6-203ENST00000402989 CDK5RAP2Q96SN8 1893 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 ABCB11O95342 1321 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 KDM3AQ9Y4C1 1321 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 A0A087X0T9 212 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TMEM110-MUSTN1A8MSY1 372 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 MEIS2O14770 477 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 LRRN2O75325 713 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 FAM228BP0C875 321 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 KLRC1P26715 233 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 POLD1P28340 1107 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 GGCXP38435 758 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 SF3A3Q12874 501 aaKnown RBP eCLIP4.79□□□□□ -1.642e-10■■■■□ 21.6
SMC6-203ENST00000402989 PDIA5Q14554 519 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 ZSCAN26Q16670 478 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TMEM119Q4V9L6 283 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 ARSHQ5FYA8 562 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 HAUS3Q68CZ6 603 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 C15orf52Q6ZUT6 534 aaKnown RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 SYCP3Q8IZU3 236 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 RETREG2Q8NC44 543 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 MSANTD4Q8NCY6 345 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 BANK1Q8NDB2 785 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TRIM58Q8NG06 486 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 ERMNQ8TAM6 284 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 DYDC2Q96IM9 177 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 CCDC43Q96MW1 224 aaKnown RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 NOX5Q96PH1 765 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 KRT12Q99456 494 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 SELENOOQ9BVL4 669 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 GLIS2Q9BZE0 524 aaPredicted RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 TRIM31Q9BZY9 425 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 LRRC27Q9C0I9 530 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 ACBD3Q9H3P7 528 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 PCIF1Q9H4Z3 704 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 ZNF277Q9NRM2 450 aaPredicted RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 RBM12Q9NTZ6 932 aaKnown RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 FAM53CQ9NYF3 392 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 PLAGL2Q9UPG8 496 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 RABGAP1Q9Y3P9 1069 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 MYH4Q9Y623 1939 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 IGKV6D-41A0A0C4DH26 115 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TMEM150BA6NC51 233 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 KCNK3O14649 394 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 MSH4O15457 936 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TLR2O60603 784 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 GFPT2O94808 682 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 SNHG28P0DPA3 235 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 FECHP22830 423 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 GUCY2DQ02846 1103 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 MKRN4PQ13434 485 aaPredicted RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 LRCH2Q5VUJ6 765 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 PPP4R3AQ6IN85 833 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 U2AF1L4Q8WU68 220 aaKnown RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 BAP1Q92560 729 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TAF4BQ92750 862 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 AP1M1Q9BXS5 423 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TSGA10Q9BZW7 698 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 PDGFDQ9GZP0 370 aaPredicted RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 PRR12Q9ULL5 1215 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 SNX12Q9UMY4 172 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 CEP104O60308 925 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 GAS7O60861 476 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 MYCNP04198 464 aaPredicted RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 XRCC5P13010 732 aaKnown RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 PPP1R2P41236 205 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 ATP1A2P50993 1020 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TRADDQ15628 312 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 MAP9Q49MG5 647 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 KIAA1755Q5JYT7 1200 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 SIAH1Q8IUQ4 282 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 C10orf67Q8IYJ2 551 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 SPATA4Q8NEY3 305 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 CCDC17Q96LX7 622 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 EIF2AK1Q9BQI3 630 aaKnown RBP4.79□□□□□ -1.64
SMC6-203ENST00000402989 TMEM39BQ9GZU3 492 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 FAM107BQ9H098 131 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 EHD4Q9H223 541 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 GCNT4Q9P109 453 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 TCEAL9Q9UHQ7 104 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 JRKLQ9Y4A0 524 aa4.79□□□□□ -1.64
SMC6-203ENST00000402989 GOLGA6BA6NDN3 693 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms