RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 DSG1Q02413 1049 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 GRIN1Q05586 938 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 ITKQ08881 620 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 MTMR1Q13613 665 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 FIGNQ5HY92 759 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 RNF219Q5W0B1 726 aaPredicted RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 BTBD8Q5XKL5 378 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 NOL8Q76FK4 1167 aaKnown RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 OTOP1Q7RTM1 612 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 LDHDQ86WU2 507 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 MIB1Q86YT6 1006 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 FMNL3Q8IVF7 1028 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 FAM126BQ8IXS8 530 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 RBM12BQ8IXT5 1001 aaKnown RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 TTLL11Q8NHH1 800 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 CHTF18Q8WVB6 975 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 CPA5Q8WXQ8 436 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 DDX11Q96FC9 970 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 TOE1Q96GM8 510 aaKnown RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 SMAD5Q99717 465 aaKnown RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 BOCQ9BWV1 1114 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 ASPSCR1Q9BZE9 553 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 CD244Q9BZW8 370 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 RNF38Q9H0F5 515 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 BCAS3Q9H6U6 928 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 IFT22Q9H7X7 185 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 CNTD2Q9H8S5 307 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 KCNK12Q9HB15 430 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 NGRNQ9NPE2 291 aaKnown RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 SPTLC3Q9NUV7 552 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 RIC8BQ9NVN3 520 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 THG1LQ9NWX6 298 aaKnown RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 H2AFY2Q9P0M6 372 aaPredicted RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 MBD1Q9UIS9 605 aaPredicted RBP3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 IRS2Q9Y4H2 1338 aa3.32□□□□□ -1.88
CBX3P9-201ENST00000402326 SCDO00767 359 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 BRINP1O60477 761 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 KRT37O76014 449 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 FARP2O94887 1054 aaPredicted RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 FKBP9O95302 570 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 LTFP02788 710 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 TMEM253P0C7T8 217 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 ZBTB48P10074 688 aaPredicted RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 ATP2A2P16615 1042 aaKnown RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 PTPN1P18031 435 aaKnown RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 GJA4P35212 333 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 CDR1P51861 262 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 NKX3-2P78367 333 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 IRF9Q00978 393 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 CACNB2Q08289 660 aaPredicted RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 TTF1Q15361 905 aaPredicted RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 ZNF174Q15697 407 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 PAN2Q504Q3 1202 aaKnown RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 CD300LDQ6UXZ3 194 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 SYDE1Q6ZW31 735 aaPredicted RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 FKBP9P1Q75LS8 142 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 ZC3H18Q86VM9 953 aaKnown RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 SPATS2Q86XZ4 545 aaKnown RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 NOSTRINQ8IVI9 506 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 POU5F2Q8N7G0 328 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 SMC1BQ8NDV3 1235 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 MZB1Q8WU39 189 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 TSR2Q969E8 191 aaKnown RBP3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 MTMR8Q96EF0 704 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 FAM84AQ96KN4 292 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 SGPP1Q9BX95 441 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 VTA1Q9NP79 307 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 DTLQ9NZJ0 730 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 PLA2G2DQ9UNK4 145 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 FAN1Q9Y2M0 1017 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 TELO2Q9Y4R8 837 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 PCDHA5Q9Y5H7 936 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 EID1Q9Y6B2 187 aa3.31□□□□□ -1.88
CBX3P9-201ENST00000402326 FAM90A27PA6NNH2 459 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 H7C1D1 291 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 ACOT7O00154 380 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 ETV2O00321 342 aaPredicted RBP3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 N4BP3O15049 544 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 ZEB2O60315 1214 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 BUB1BO60566 1050 aaPredicted RBP3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 PRKD3O94806 890 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 LRG1P02750 347 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 FAHP16930 419 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 FBLN1P23142 703 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 KPNA1P52294 538 aaPredicted RBP3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 NCKAP1LP55160 1127 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 DLG4P78352 724 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 OCRLQ01968 901 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 MESP2Q0VG99 397 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 LRRC41Q15345 812 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 CPZQ66K79 652 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 FSTL4Q6MZW2 842 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 TEPPQ6URK8 271 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 NECAB2Q7Z6G3 386 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 CNTD1Q8N815 330 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 DLG3Q92796 817 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 SCYL1Q96KG9 808 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 PPP1R16BQ96T49 567 aa3.3□□□□□ -1.88
CBX3P9-201ENST00000402326 SLC38A3Q99624 504 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms