RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 RPA1P27694 616 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 PSMC5P62195 406 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 POU5F1BQ06416 359 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 MFSD10Q14728 455 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 SLC39A14Q15043 492 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 PCBP1Q15365 356 aaKnown RBP eCLIP8.47□□□□□ -1.05
USP16-204ENST00000399976 GNASQ5JWF2 1037 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 TAF2Q6P1X5 1199 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 FAM126BQ8IXS8 530 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 RSPH1Q8WYR4 309 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 HSD17B14Q9BPX1 270 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 CCSER1Q9C0I3 900 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 SRPRBQ9Y5M8 271 aaKnown RBP8.47□□□□□ -1.05
USP16-204ENST00000399976 ZMYM2Q9UBW7 1377 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 A0A1W2PPC1 479 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 MAGEB2O15479 319 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 TCF7P36402 384 aaPredicted RBP8.47□□□□□ -1.05
USP16-204ENST00000399976 RFC5P40937 340 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 TARBP2Q15633 366 aaKnown RBP8.47□□□□□ -1.05
USP16-204ENST00000399976 HSDL1Q3SXM5 330 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 XKR3Q5GH77 459 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 CNNM4Q6P4Q7 775 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 CYFIP1Q7L576 1253 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 LINC01465Q8N7H1 131 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 KCNG4Q8TDN1 519 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 PCYT2Q99447 389 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 NT5C3AQ9H0P0 336 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 UNC45AQ9H3U1 944 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 AZI2Q9H6S1 392 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 MAGEF1Q9HAY2 307 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 STARD7Q9NQZ5 370 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 DISC1Q9NRI5 854 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 KCNG1Q9UIX4 513 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 PCDHA12Q9UN75 941 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 RALGAPA2Q2PPJ7 1873 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 IGKV6-21A0A0C4DH24 114 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 H3BRB1 525 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 STBD1O95210 358 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 HSP90AA1P07900 732 aaKnown RBP8.46□□□□□ -1.05
USP16-204ENST00000399976 ABCD1P33897 745 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 ITGA7Q13683 1181 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 ANO1Q5XXA6 986 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 CYP2W1Q8TAV3 490 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 PGBD1Q96JS3 809 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 CUEDC2Q9H467 287 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 TUT1Q9H6E5 874 aaKnown RBP8.46□□□□□ -1.05
USP16-204ENST00000399976 ZNF302Q9NR11 478 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 GJB4Q9NTQ9 266 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 USP25Q9UHP3 1055 aa8.46□□□□□ -1.05
USP16-204ENST00000399976 MYH11P35749 1972 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 MYADML2A6NDP7 307 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 QARSP47897 775 aaKnown RBP8.46□□□□□ -1.06
USP16-204ENST00000399976 STAT5BP51692 787 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 RTP1P59025 263 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 MIER3Q7Z3K6 550 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 CEP89Q96ST8 783 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 ZSWIM4Q9H7M6 989 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 NRBP2Q9NSY0 501 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 RCOR1Q9UKL0 485 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 TBX21Q9UL17 535 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 PCDHA2Q9Y5H9 948 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 SMIM35A0A1B0GVV1 85 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 PGK1P00558 417 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 BMP8BP34820 402 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 SERINC5Q86VE9 423 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 TMEM87AQ8NBN3 555 aa8.46□□□□□ -1.06
USP16-204ENST00000399976 SCAND2PQ9GZW5 306 aaPredicted RBP8.46□□□□□ -1.06
USP16-204ENST00000399976 GRIN2DO15399 1336 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 MICAL3Q7RTP6 2002 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 OATP04181 439 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 PLCB4Q15147 1175 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 DTHD1Q6ZMT9 781 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 OTUD6AQ7L8S5 288 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 IFNLR1Q8IU57 520 aaPredicted RBP8.45□□□□□ -1.06
USP16-204ENST00000399976 ELOA2Q8IYF1 753 aaPredicted RBP8.45□□□□□ -1.06
USP16-204ENST00000399976 USP38Q8NB14 1042 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 COPS5Q92905 334 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 NFKBIZQ9BYH8 718 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 TTC12Q9H892 705 aaPredicted RBP8.45□□□□□ -1.06
USP16-204ENST00000399976 FAM205CA6NFA0 338 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 DCDC2CA8MYV0 355 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 CUTAO60888 179 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 EN2P19622 333 aaPredicted RBP8.45□□□□□ -1.06
USP16-204ENST00000399976 PTGDRQ13258 359 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 TRIM71Q2Q1W2 868 aaKnown RBP8.45□□□□□ -1.06
USP16-204ENST00000399976 TMEM119Q4V9L6 283 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 ODR4Q5SWX8 454 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 GJC2Q5T442 439 aaPredicted RBP8.45□□□□□ -1.06
USP16-204ENST00000399976 EEPD1Q7L9B9 569 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 LINC00301Q8NCQ3 95 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 STK17AQ9UEE5 414 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 PCDHB6Q9Y5E3 794 aa8.45□□□□□ -1.06
USP16-204ENST00000399976 TRIP12Q14669 1992 aaPredicted RBP8.44□□□□□ -1.06
USP16-204ENST00000399976 BFSP2Q13515 415 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 TMEM60Q9H2L4 133 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 C17orf75Q9HAS0 396 aa8.44□□□□□ -1.06
USP16-204ENST00000399976 RNF216Q9NWF9 866 aaPredicted RBP8.44□□□□□ -1.06
USP16-204ENST00000399976 FBXO2Q9UK22 296 aaPredicted RBP8.44□□□□□ -1.06
USP16-204ENST00000399976 A0A1W2PQ27 194 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms