RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 MIS12Q9H081 205 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 ZHX2Q9Y6X8 837 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 ZNF233A6NK53 670 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 IGFBP4P22692 258 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 MSH2P43246 934 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 GRIN1Q05586 938 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 RALGDSQ12967 914 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 MAGEB10Q96LZ2 347 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 MMP19Q99542 508 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 HYOU1Q9Y4L1 999 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 GSNP06396 782 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 CIITAP33076 1130 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 HDLBPQ00341 1268 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 SFMBT2Q5VUG0 894 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 HEATR4Q86WZ0 1026 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 REXO1Q8N1G1 1221 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 STX19Q8N4C7 294 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 SH3KBP1Q96B97 665 aa11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-208ENST00000399601 SMCO2A6NFE2 343 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 TRIM27P14373 513 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 MTMR3Q13615 1198 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 SH3GL3Q99963 347 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 SSTR3P32745 418 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 ATXN3P54252 364 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 CPP00450 1065 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 PMLP29590 882 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 MRPS35P82673 323 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 UXS1Q8NBZ7 420 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 SENP1Q9P0U3 644 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 ZNF532Q9HCE3 1301 aa11.96□□□□□ -0.49
CACNA1C-208ENST00000399601 IFNA8P32881 189 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 UBAP1Q9NZ09 502 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 ZNF148Q9UQR1 794 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 GPAA1O43292 621 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 IFT88Q13099 833 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 HADHQ16836 314 aaKnown RBP11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 ACCSLQ4AC99 568 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 DDX53Q86TM3 631 aaKnown RBP11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 ZC3H18Q86VM9 953 aaKnown RBP11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 CENPKQ9BS16 269 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 KLHL31Q9H511 634 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 RERGLQ9H628 205 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 KLF15Q9UIH9 416 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 AMFRQ9UKV5 643 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 L3MBTL1Q9Y468 752 aa11.96□□□□□ -0.5
CACNA1C-208ENST00000399601 CHRNDQ07001 517 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 CDKL2Q92772 493 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 CCT7Q99832 543 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 AGRPO00253 132 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 KRT75O95678 551 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 KRT4P19013 534 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 ERFP50548 548 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 TBC1D9Q6ZT07 1266 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 FBXL21Q9UKT6 434 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 MAP3K13O43283 966 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 AOC3Q16853 763 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 BTN2A1Q7KYR7 527 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 TMEM87BQ96K49 555 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 SLCO1A2P46721 670 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 CFAP221Q4G0U5 840 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 PI4K2BQ8TCG2 481 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 FAM149B1Q96BN6 582 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 KIFC3Q9BVG8 833 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 TRIM15Q9C019 465 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 CDC40O60508 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 TNNI3KQ59H18 835 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 TRIM69Q86WT6 500 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 STAG2Q8N3U4 1231 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 TMX3Q96JJ7 454 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 FGFR1OP2Q9NVK5 253 aa11.95□□□□□ -0.5
CACNA1C-208ENST00000399601 LRRC53A6NM62 1247 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 PPP1R2P41236 205 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 VEPH1Q14D04 833 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 CDHR1Q96JP9 859 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 LGR6Q9HBX8 967 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 DNAJC17Q9NVM6 304 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 TSC22D4Q9Y3Q8 395 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 CCT5P48643 541 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 SYCE1Q8N0S2 351 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 NLRP4Q96MN2 994 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 SH3GL1Q99961 368 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 CUL7Q14999 1698 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 ARHGAP17Q68EM7 881 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 ST13P5Q8NFI4 369 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 CAPS2Q9BXY5 557 aa11.94□□□□□ -0.5
CACNA1C-208ENST00000399601 RAB17Q9H0T7 212 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms