RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 NMIQ13287 307 aaPredicted RBP20.9■□□□□ 0.94
UFD1-202ENST00000399523 TSHZ1Q6ZSZ6 1077 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 ASCL5Q7RTU5 278 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 RSPH3Q86UC2 560 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 RTN4RL1Q86UN2 441 aaPredicted RBP20.9■□□□□ 0.94
UFD1-202ENST00000399523 FCHSD1Q86WN1 690 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 TLE6Q9H808 572 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 ZSWIM5Q9P217 1185 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 TELO2Q9Y4R8 837 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 MYO10Q9HD67 2058 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 WDR87Q6ZQQ6 2873 aa20.89■□□□□ 0.94
UFD1-202ENST00000399523 FRMPD4Q14CM0 1322 aa20.89■□□□□ 0.93
UFD1-202ENST00000399523 KLRF2D3W0D1 207 aa20.89■□□□□ 0.93
UFD1-202ENST00000399523 GALR2O43603 387 aaPredicted RBP20.89■□□□□ 0.93
UFD1-202ENST00000399523 UTP14CQ5TAP6 766 aaKnown RBP20.89■□□□□ 0.93
UFD1-202ENST00000399523 NPAS4Q8IUM7 802 aa20.89■□□□□ 0.93
UFD1-202ENST00000399523 RIPOR3Q96MK2 946 aa20.89■□□□□ 0.93
UFD1-202ENST00000399523 AGO3Q9H9G7 860 aaKnown RBP20.89■□□□□ 0.93
UFD1-202ENST00000399523 PCDHB15Q9Y5E8 787 aa20.89■□□□□ 0.93
UFD1-202ENST00000399523 PCDHGC5Q9Y5F6 944 aa20.89■□□□□ 0.93
UFD1-202ENST00000399523 PLXNA4Q9HCM2 1894 aa20.88■□□□□ 0.93
UFD1-202ENST00000399523 MBLAC1A4D2B0 266 aaPredicted RBP20.88■□□□□ 0.93
UFD1-202ENST00000399523 B4E1Z4 1266 aa20.88■□□□□ 0.93
UFD1-202ENST00000399523 FIBPO43427 364 aa20.88■□□□□ 0.93
UFD1-202ENST00000399523 TRAF1Q13077 416 aa20.88■□□□□ 0.93
UFD1-202ENST00000399523 SENP7Q9BQF6 1050 aa20.88■□□□□ 0.93
UFD1-202ENST00000399523 FTHL17Q9BXU8 183 aa20.88■□□□□ 0.93
UFD1-202ENST00000399523 LAMA4Q16363 1823 aa20.88■□□□□ 0.93
UFD1-202ENST00000399523 FSD2A1L4K1 749 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 PRR23AA6NEV1 266 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 PDGFBP01127 241 aaPredicted RBP20.87■□□□□ 0.93
UFD1-202ENST00000399523 NBL1P41271 181 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 PDE1AP54750 535 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 ERMP1Q7Z2K6 904 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 VN1R2Q8NFZ6 395 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 DNAJB3Q8WWF6 145 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 CDY2AQ9Y6F7 541 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 SQORQ9Y6N5 450 aa20.87■□□□□ 0.93
UFD1-202ENST00000399523 STAG3L1P0CL83 205 aa20.86■□□□□ 0.93
UFD1-202ENST00000399523 CD52P31358 61 aa20.86■□□□□ 0.93
UFD1-202ENST00000399523 RBM10P98175 930 aaKnown RBP20.86■□□□□ 0.93
UFD1-202ENST00000399523 UBE3AQ05086 875 aa20.86■□□□□ 0.93
UFD1-202ENST00000399523 PPFIA1Q13136 1202 aa20.86■□□□□ 0.93
UFD1-202ENST00000399523 CDCA3Q99618 268 aaPredicted RBP20.86■□□□□ 0.93
UFD1-202ENST00000399523 RTEL1Q9NZ71 1219 aa20.86■□□□□ 0.93
UFD1-202ENST00000399523 MAD2L2Q9UI95 211 aa20.86■□□□□ 0.93
UFD1-202ENST00000399523 TUBE1Q9UJT0 475 aa20.86■□□□□ 0.93
UFD1-202ENST00000399523 TRPC6Q9Y210 931 aa20.86■□□□□ 0.93
UFD1-202ENST00000399523 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
UFD1-202ENST00000399523 PER2O15055 1255 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 MFAP1P55081 439 aaKnown RBP20.85■□□□□ 0.93
UFD1-202ENST00000399523 MRPS6P82932 125 aaKnown RBP20.85■□□□□ 0.93
UFD1-202ENST00000399523 GRIK4Q16099 956 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 DUSP6Q16828 381 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 SLC35G1Q2M3R5 365 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 PAN2Q504Q3 1202 aaKnown RBP20.85■□□□□ 0.93
UFD1-202ENST00000399523 MARCH8Q5T0T0 291 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 TMEM184AQ6ZMB5 413 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 MICAL1Q8TDZ2 1067 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 NEK1Q96PY6 1258 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 S1PR5Q9H228 398 aa20.85■□□□□ 0.93
UFD1-202ENST00000399523 EP300Q09472 2414 aaPredicted RBP20.85■□□□□ 0.93
UFD1-202ENST00000399523 LOXHD1Q8IVV2 1947 aa20.84■□□□□ 0.93
UFD1-202ENST00000399523 RPLP2P05387 115 aaKnown RBP20.84■□□□□ 0.93
UFD1-202ENST00000399523 SP4Q02446 784 aa20.84■□□□□ 0.93
UFD1-202ENST00000399523 KCNC3Q14003 757 aa20.84■□□□□ 0.93
UFD1-202ENST00000399523 RIOX1Q9H6W3 641 aa20.84■□□□□ 0.93
UFD1-202ENST00000399523 ZNF292O60281 2723 aa20.84■□□□□ 0.93
UFD1-202ENST00000399523 PPFIA3O75145 1194 aa20.83■□□□□ 0.93
UFD1-202ENST00000399523 SCG2P13521 617 aa20.83■□□□□ 0.93
UFD1-202ENST00000399523 TCF7P36402 384 aaPredicted RBP20.83■□□□□ 0.93
UFD1-202ENST00000399523 IFIT1BQ5T764 474 aaKnown RBP20.83■□□□□ 0.93
UFD1-202ENST00000399523 IER5Q5VY09 327 aa20.83■□□□□ 0.93
UFD1-202ENST00000399523 HOMER1Q86YM7 354 aa20.83■□□□□ 0.93
UFD1-202ENST00000399523 GIMAP8Q8ND71 665 aaPredicted RBP20.83■□□□□ 0.93
UFD1-202ENST00000399523 PIGSQ96S52 555 aa20.83■□□□□ 0.93
UFD1-202ENST00000399523 UBAC1Q9BSL1 405 aa20.83■□□□□ 0.93
UFD1-202ENST00000399523 GATMP50440 423 aa20.82■□□□□ 0.92
UFD1-202ENST00000399523 SEC23AQ15436 765 aa20.82■□□□□ 0.92
UFD1-202ENST00000399523 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
UFD1-202ENST00000399523 PDE12Q6L8Q7 609 aaKnown RBP20.82■□□□□ 0.92
UFD1-202ENST00000399523 ZBTB33Q86T24 672 aa20.82■□□□□ 0.92
UFD1-202ENST00000399523 KRT23Q9C075 422 aa20.82■□□□□ 0.92
UFD1-202ENST00000399523 ERAP1Q9NZ08 941 aa20.82■□□□□ 0.92
UFD1-202ENST00000399523 PADI3Q9ULW8 664 aa20.82■□□□□ 0.92
UFD1-202ENST00000399523 PCDHB12Q9Y5F1 795 aa20.82■□□□□ 0.92
UFD1-202ENST00000399523 PNMA6FA0A0J9YX94 578 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 FSCN2O14926 492 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 ERVFC1P60507 584 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 PCNX4Q63HM2 1172 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 ANKRD54Q6NXT1 300 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 XRRA1Q6P2D8 792 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 SYCE2Q6PIF2 218 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 UBALD2Q8IYN6 164 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 TMEM105Q8N8V8 129 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 KREMEN2Q8NCW0 462 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 RASGRP4Q8TDF6 673 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 SEPT1Q8WYJ6 367 aa20.81■□□□□ 0.92
UFD1-202ENST00000399523 ZBTB47Q9UFB7 747 aaPredicted RBP20.81■□□□□ 0.92
UFD1-202ENST00000399523 FNDC1Q4ZHG4 1894 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms