RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 ACTN1P12814 892 aa23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 KRT31Q15323 416 aa23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 RAB44Q7Z6P3 723 aaPredicted RBP23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 GPR101Q96P66 508 aaPredicted RBP23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 DR1Q01658 176 aa23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 MYO1EQ12965 1108 aa23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 DNAJC24Q6P3W2 148 aa23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 SCYL3Q8IZE3 742 aa23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 PARVGQ9HBI0 331 aa23.11■■□□□ 1.29
ANKRD28-201ENST00000399451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.1■■□□□ 1.293e-8■□□□□ 10.1
ANKRD28-201ENST00000399451 CASP8Q14790 479 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 DCLK2Q8N568 766 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 PIH1D3Q9NQM4 214 aaKnown RBP23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 POLIQ9UNA4 740 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 PPME1Q9Y570 386 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 NLRP10Q86W26 655 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 PDZD8Q8NEN9 1154 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 LRRC4Q9HBW1 653 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 SH3GLB2Q9NR46 395 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 ANKRD20A4Q4UJ75 823 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 ANKRD20A8PQ5CZ79 823 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 ANKRD20A2Q5SQ80 823 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 ANKRD20A1Q5TYW2 823 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 PPP4R3CPQ6ZMV5 832 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 FAM160B2Q86V87 743 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 NEK9Q8TD19 979 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 SASH1O94885 1247 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 ABCB6Q9NP58 842 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 NXF1Q9UBU9 619 aaKnown RBP23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 ARAP3Q8WWN8 1544 aa23.1■■□□□ 1.29
ANKRD28-201ENST00000399451 USP17L2Q6R6M4 530 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 SARM1Q6SZW1 724 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 TPX2Q9ULW0 747 aaKnown RBP23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 GOLGA8SH3BPF8 625 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 EIF3BP55884 814 aaKnown RBP23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 PDXDC2PQ6P474 469 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 TXLNGQ9NUQ3 528 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 A0A087WUV0 522 aaPredicted RBP23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 SETSIPP0DME0 302 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 STX1BP61266 288 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 TMTC4Q5T4D3 741 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 DSTYKQ6XUX3 929 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 CCNYQ8ND76 341 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 AIFM3Q96NN9 605 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 SLITRK6Q9H5Y7 841 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 USP17L8P0C7I0 530 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 NR1D1P20393 614 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 UBE2SQ16763 222 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 FAM133BQ5BKY9 247 aaKnown RBP23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 RASIP1Q5U651 963 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 DARS2Q6PI48 645 aaKnown RBP23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 NOVA2Q9UNW9 492 aaKnown RBP23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 SRGAP2CP0DJJ0 459 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 DYNLT1P63172 113 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 TCP11Q8WWU5 503 aa23.09■■□□□ 1.29
ANKRD28-201ENST00000399451 SLCO1A2P46721 670 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 SLC7A5Q01650 507 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 C1orf228Q6PIY5 440 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 TUBB6Q9BUF5 446 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 COA1Q9GZY4 146 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 ACTR5Q9H9F9 607 aaPredicted RBP23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 MT-ND3P03897 115 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 SNAP25P60880 206 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 CUL1Q13616 776 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 CDC37Q16543 378 aaPredicted RBP23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 KCTD6Q8NC69 237 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 TRIM4Q9C037 500 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 RPAP1Q9BWH6 1393 aaPredicted RBP23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 ATP1A3P13637 1013 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 RNF139Q8WU17 664 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 DYNLL2Q96FJ2 89 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 ZMYND12Q9H0C1 365 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 EPS15L1Q9UBC2 864 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 PALLDQ8WX93 1383 aa23.08■■□□□ 1.29
ANKRD28-201ENST00000399451 MGEA5O60502 916 aa23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 FAM49AQ9H0Q0 323 aaPredicted RBP23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 MAGED2Q9UNF1 606 aaPredicted RBP23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 HEG1Q9ULI3 1381 aa23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 RASGRF2O14827 1237 aa23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 BASP1P80723 227 aaKnown RBP23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 SIX6OS1Q8N1H7 587 aa23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 SPDL1Q96EA4 605 aa23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 FMO2Q99518 471 aa23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 AP1M1Q9BXS5 423 aa23.08■■□□□ 1.28
ANKRD28-201ENST00000399451 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 STMN1P16949 149 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 MYLK4Q86YV6 388 aaPredicted RBP23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 KLHL29Q96CT2 875 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 KIF1BO60333 1816 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 FRMD3A2A2Y4 597 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 ERVV-1B6SEH8 477 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 THEGQ9P2T0 379 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 MXI1P50539 228 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 HMGB1P1B2RPK0 211 aaPredicted RBP23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 RPSAP08865 295 aaKnown RBP23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 NLRP4Q96MN2 994 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 TTC1Q99614 292 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 PNMA6FA0A0J9YX94 578 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 CYP27A1Q02318 531 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 ALCAMQ13740 583 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms