RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 SLITRK3O94933 977 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PRLRP16471 622 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 KLK7P49862 253 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PSMC6P62333 389 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CKAP4Q07065 602 aaKnown RBP19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 SLC9C1Q4G0N8 1177 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CCDC174Q6PII3 467 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 B3GNT9Q6UX72 402 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TRAPPC11Q7Z392 1133 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TEKT3Q9BXF9 490 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 DEF6Q9H4E7 631 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PLCB1Q9NQ66 1216 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ARMCX3Q9UH62 379 aaPredicted RBP19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 DAAM1Q9Y4D1 1078 aa19.53■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ATAD5Q96QE3 1844 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PHF20L1A8MW92 1017 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 RBAK-RBAKDNI3L0D1 243 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PJA2O43164 708 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ZRANB2O95218 330 aaKnown RBP eCLIP19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 SERPING1P05155 500 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 NR2F2P24468 414 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ANXA13P27216 316 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 EPS15P42566 896 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 KCNMA1Q12791 1236 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 RINT1Q6NUQ1 792 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 RRAGAQ7L523 313 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 RNF10Q8N5U6 811 aaKnown RBP19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MSANTD4Q8NCY6 345 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MXRA8Q9BRK3 442 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ZNF577Q9BSK1 485 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 WDR18Q9BV38 432 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ZHX3Q9H4I2 956 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ARHGAP20Q9P2F6 1191 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 FBXL5Q9UKA1 691 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 SAR1BQ9Y6B6 198 aa19.52■□□□□ 0.72
HLA-DQB1-204ENST00000399084 RPTORQ8N122 1335 aa19.52■□□□□ 0.71
HLA-DQB1-204ENST00000399084 GTPBP10A4D1E9 387 aaKnown RBP19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 EML1O00423 815 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 AKR1B10O60218 316 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 MCM3P25205 808 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 RASA3Q14644 834 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TEX35Q5T0J7 233 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 C1orf186Q6ZWK4 172 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 SFR1Q86XK3 245 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CYP2W1Q8TAV3 490 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 GOLGA5Q8TBA6 731 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 MKNK1Q9BUB5 465 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 IFIH1Q9BYX4 1025 aaKnown RBP19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ARFGAP3Q9NP61 516 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TBC1D7Q9P0N9 293 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 PCDHA13Q9Y5I0 950 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 BZW2Q9Y6E2 419 aaKnown RBP19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 LTBP3Q9NS15 1303 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 LOXHD1Q8IVV2 1947 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 NPHP3-ACAD11A0A0J9YXS1 232 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 A0A0U1RQJ8 604 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TACC1O75410 805 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 KIF11P52732 1056 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ZNF131P52739 623 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 USP14P54578 494 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 MYBPC2Q14324 1141 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 C10orf76Q5T2E6 689 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 SFMBT2Q5VUG0 894 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 IQCEQ6IPM2 695 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 MIGA2Q7L4E1 593 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 FMNL3Q8IVF7 1028 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 NELFCDQ8IXH7 590 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ATRIPQ8WXE1 791 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 SECISBP2LQ93073 1101 aaKnown RBP19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 GBP3Q9H0R5 595 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 AIPL1Q9NZN9 384 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 RAB21Q9UL25 225 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CCPG1Q9ULG6 757 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 JRKLQ9Y4A0 524 aa19.51■□□□□ 0.71
HLA-DQB1-204ENST00000399084 SHTN1A0MZ66 631 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 LRRC53A6NM62 1247 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 PPP1R12BO60237 982 aaPredicted RBP19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ERLIN1O75477 346 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 FAM13AO94988 1023 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 EPB41P11171 864 aaKnown RBP19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 GUCY2CP25092 1073 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 POLD1P28340 1107 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ASTE1Q2TB18 679 aaPredicted RBP19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 MSL3Q8N5Y2 521 aaKnown RBP19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 PARD6BQ9BYG5 372 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 PARVGQ9HBI0 331 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 FRMPD4Q14CM0 1322 aa19.5■□□□□ 0.71
HLA-DQB1-204ENST00000399084 IPO5O00410 1097 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 MAPTP10636 758 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 XRCC5P13010 732 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 EIF4A3P38919 411 aaKnown RBP19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 KCNH2Q12809 1159 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ALCAMQ13740 583 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 NBPF9Q3BBW0 867 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 XRRA1Q6P2D8 792 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CCDC125Q86Z20 511 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TPH2Q8IWU9 490 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 CCDC155Q8N6L0 562 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 TMEM174Q8WUU8 243 aa19.49■□□□□ 0.71
HLA-DQB1-204ENST00000399084 ZNF341Q9BYN7 854 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms