RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 TBC1D10BQ4KMP7 808 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 DARS2Q6PI48 645 aaKnown RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 TRIML2Q8N7C3 387 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 CHURC1Q8WUH1 139 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 DEPDC1BQ8WUY9 529 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 NCAPGQ9BPX3 1015 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 TRIM56Q9BRZ2 755 aaKnown RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 LRRC1Q9BTT6 524 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 ALDH8A1Q9H2A2 487 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 PSD3Q9NYI0 1048 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 SCINQ9Y6U3 715 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 NEDD4P46934 1319 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 MAP3K15Q6ZN16 1313 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 STK36Q9NRP7 1315 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 MDH1P40925 334 aaKnown RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 KCNJ6P48051 423 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 MAP7D3Q8IWC1 876 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 HIPK4Q8NE63 616 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 RIOK1Q9BRS2 568 aaKnown RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 IRX2Q9BZI1 471 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 PIH1D3Q9NQM4 214 aaKnown RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 GINM1Q9NU53 330 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 SLC4A7Q9Y6M7 1214 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 RASSF10A6NK89 507 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 H0YCG3 227 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 CASP2P42575 452 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 GTF2IP78347 998 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 LRRC14Q15048 493 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 COA7Q96BR5 231 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 LRRC37BQ96QE4 947 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 MED10Q9BTT4 135 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 MRPL47Q9HD33 250 aaKnown RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 SYNGAP1Q96PV0 1343 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 KIF28PB7ZC32 967 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 PPP4R3CPQ6ZMV5 832 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 RHOT2Q8IXI1 618 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 FGD4Q96M96 766 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 SAMD9LQ8IVG5 1584 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 STX1BP61266 288 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 RSBN1LQ6PCB5 846 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 KRT26Q7Z3Y9 468 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 CRLF3Q8IUI8 442 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 TBC1D10CQ8IV04 446 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 DCLK2Q8N568 766 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 KCTD6Q8NC69 237 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 TTC17Q96AE7 1141 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.3□□□□□ -0.924e-16■□□□□ 9.4
CTNND1-205ENST00000399050 ATG3Q9NT62 314 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 G3BP2Q9UN86 482 aaKnown RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 GCFC2P16383 781 aaKnown RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 EEF1B2P24534 225 aaKnown RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 EEF1DP29692 281 aaKnown RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 RGS9BPQ6ZS82 235 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 KCTD1Q719H9 257 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 PDZD4Q76G19 769 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 CCDC117Q8IWD4 279 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 SRRM1Q8IYB3 904 aaKnown RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 MIS12Q9H081 205 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 SMYD3Q9H7B4 428 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 PPARGC1AQ9UBK2 798 aaKnown RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 FBXL5Q9UKA1 691 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 FIS1Q9Y3D6 152 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 CYP2D7A0A087X1C5 515 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 BBS9Q3SYG4 887 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 CERKLQ49MI3 558 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 C1orf146Q5VVC0 180 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 UNC13DQ70J99 1090 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 SPATA4Q8NEY3 305 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 CCDC138Q96M89 665 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 PRMT1Q99873 361 aaKnown RBP9.3□□□□□ -0.92
CTNND1-205ENST00000399050 ETNK1Q9HBU6 452 aa9.3□□□□□ -0.92
CTNND1-205ENST00000399050 TMEM191BP0C7N4 346 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 ACTN1P12814 892 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 PDE6BP35913 854 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 CDR2Q01850 454 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 KIF22Q14807 665 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 SLFN13Q68D06 897 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 SH2D3CQ8N5H7 860 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 IL17RAQ96F46 866 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 DDX47Q9H0S4 455 aaKnown RBP9.29□□□□□ -0.92
CTNND1-205ENST00000399050 FOSP01100 380 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-205ENST00000399050 ITKQ08881 620 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 PRPSAP1Q14558 356 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 DACT3Q96B18 629 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-205ENST00000399050 ZNF577Q9BSK1 485 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 SH3GLB2Q9NR46 395 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 NOC2LQ9Y3T9 749 aaKnown RBP9.29□□□□□ -0.92
CTNND1-205ENST00000399050 NUB1Q9Y5A7 615 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 PPP1R37O75864 691 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 ELF1P32519 619 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 PDCD2Q16342 344 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-205ENST00000399050 UBE2SQ16763 222 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 ZBTB8OSQ8IWT0 167 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTNND1-205ENST00000399050 CAPN9O14815 690 aa9.29□□□□□ -0.92
CTNND1-205ENST00000399050 HNRNPDLO14979 420 aaKnown RBP9.29□□□□□ -0.92
CTNND1-205ENST00000399050 DNAJC24Q6P3W2 148 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms