RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 ADAM17P78536 824 aa16.43■□□□□ 0.22
RAB1A-201ENST00000398529 LPIN1Q14693 890 aa16.43■□□□□ 0.22
RAB1A-201ENST00000398529 TSHZ1Q6ZSZ6 1077 aa16.43■□□□□ 0.22
RAB1A-201ENST00000398529 SEPT1Q8WYJ6 367 aa16.43■□□□□ 0.22
RAB1A-201ENST00000398529 EDAQ92838 391 aa16.43■□□□□ 0.22
RAB1A-201ENST00000398529 P2RX5Q93086 422 aa16.43■□□□□ 0.22
RAB1A-201ENST00000398529 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
RAB1A-201ENST00000398529 ALG13Q9NP73 1137 aaKnown RBP16.43■□□□□ 0.22
RAB1A-201ENST00000398529 RNF216Q9NWF9 866 aaPredicted RBP16.43■□□□□ 0.22
RAB1A-201ENST00000398529 TTC3P53804 2025 aa16.43■□□□□ 0.22
RAB1A-201ENST00000398529 RRN3P2A6NIE6 340 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 DLX2Q07687 328 aaPredicted RBP16.42■□□□□ 0.22
RAB1A-201ENST00000398529 ADAM15Q13444 863 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 GRIK4Q16099 956 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 SUGP1Q8IWZ8 645 aaKnown RBP16.42■□□□□ 0.22
RAB1A-201ENST00000398529 CMTR2Q8IYT2 770 aaKnown RBP16.42■□□□□ 0.22
RAB1A-201ENST00000398529 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 CTCFLQ8NI51 663 aaPredicted RBP16.42■□□□□ 0.22
RAB1A-201ENST00000398529 DNAJB3Q8WWF6 145 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 LRFN2Q9ULH4 789 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 PLAGL2Q9UPG8 496 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 CDY2AQ9Y6F7 541 aa16.42■□□□□ 0.22
RAB1A-201ENST00000398529 RBAK-RBAKDNI3L0D1 243 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 CYTH3O43739 400 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 DGKIO75912 1065 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 MARK3P27448 753 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 IGBP1P78318 339 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 MRPS6P82932 125 aaKnown RBP16.41■□□□□ 0.22
RAB1A-201ENST00000398529 SEMA3FQ13275 785 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 FBXO47Q5MNV8 452 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 RUFY4Q6ZNE9 571 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 PBXIP1Q96AQ6 731 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 ZNF689Q96CS4 500 aaPredicted RBP16.41■□□□□ 0.22
RAB1A-201ENST00000398529 LZTS2Q9BRK4 669 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 AZI2Q9H6S1 392 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 ATG2AQ2TAZ0 1938 aa16.41■□□□□ 0.22
RAB1A-201ENST00000398529 PIK3CDO00329 1044 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 TBX10O75333 385 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 PTPN5P54829 565 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 PTH1RQ03431 593 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 MGAT3Q09327 533 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 TROAPQ12815 778 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 USP17L6PQ6QN14 398 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 NPAS4Q8IUM7 802 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 MICAL1Q8TDZ2 1067 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 FAM49AQ9H0Q0 323 aaPredicted RBP16.4■□□□□ 0.22
RAB1A-201ENST00000398529 SQORQ9Y6N5 450 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 ZNF318Q5VUA4 2279 aa16.4■□□□□ 0.22
RAB1A-201ENST00000398529 FSD2A1L4K1 749 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 TMEM221A6NGB7 291 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 SPDYE3A6NKU9 549 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 M0R296 226 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 MAFGO15525 162 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 LINC01565O15544 149 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 CD52P31358 61 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 GTF2F1P35269 517 aaKnown RBP eCLIP16.39■□□□□ 0.218e-9■■■■■ 35.3
RAB1A-201ENST00000398529 GNAQP50148 359 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 PAK2Q13177 524 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 MTMR1Q13613 665 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 SPOUT1Q5T280 376 aaKnown RBP16.39■□□□□ 0.21
RAB1A-201ENST00000398529 FAM43BQ6ZT52 329 aaPredicted RBP16.39■□□□□ 0.21
RAB1A-201ENST00000398529 TRIM67Q6ZTA4 783 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 BMP8AQ7Z5Y6 402 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 EFHBQ8N7U6 833 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 LSG1Q9H089 658 aaKnown RBP16.39■□□□□ 0.21
RAB1A-201ENST00000398529 PSTPIP2Q9H939 334 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 RC3H2Q9HBD1 1191 aaKnown RBP16.39■□□□□ 0.21
RAB1A-201ENST00000398529 AAASQ9NRG9 546 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 PCDHB12Q9Y5F1 795 aa16.39■□□□□ 0.21
RAB1A-201ENST00000398529 MRPL42Q9Y6G3 142 aaKnown RBP16.39■□□□□ 0.21
RAB1A-201ENST00000398529 C5orf42Q9H799 3197 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 MBLAC1A4D2B0 266 aaPredicted RBP16.38■□□□□ 0.21
RAB1A-201ENST00000398529 EYA4O95677 639 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 SRGAP2BP0DMP2 458 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 SMARCA1P28370 1054 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 NRIP1P48552 1158 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 SLC35G1Q2M3R5 365 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 PAN2Q504Q3 1202 aaKnown RBP16.38■□□□□ 0.21
RAB1A-201ENST00000398529 RBM23Q86U06 439 aaKnown RBP16.38■□□□□ 0.21
RAB1A-201ENST00000398529 KLHL23Q8NBE8 558 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 SPPL3Q8TCT6 385 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 MAP3K14Q99558 947 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 SPZ1Q9BXG8 430 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 TLE6Q9H808 572 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 ANO2Q9NQ90 1003 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 TRPV2Q9Y5S1 764 aa16.38■□□□□ 0.21
RAB1A-201ENST00000398529 LOXHD1Q8IVV2 1947 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 GSTTP1A0A1W2PQM5 241 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 ITGB1P05556 798 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 CYP21A2P08686 494 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 LINC00271P0C7V0 271 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 SCG2P13521 617 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 KCNA2P16389 499 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 IBSPP21815 317 aaPredicted RBP16.37■□□□□ 0.21
RAB1A-201ENST00000398529 COASYQ13057 564 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 C8orf34Q49A92 452 aa16.37■□□□□ 0.21
RAB1A-201ENST00000398529 ODR4Q5SWX8 454 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms