RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 FAM50BQ9Y247 325 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 DHX29Q7Z478 1369 aaKnown RBP13.74□□□□□ -0.21
CCBE1-201ENST00000398179 ATP2A1O14983 1001 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 NCAM2O15394 837 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 CNOT3O75175 753 aaKnown RBP13.74□□□□□ -0.21
CCBE1-201ENST00000398179 ZBED1O96006 694 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 ACADSP16219 412 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 GAP43P17677 238 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 PSME1Q06323 249 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 NFIL3Q16649 462 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 HECTD3Q5T447 861 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 NSMCE1Q8WV22 266 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 CNKSR1Q969H4 720 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 GTF2A1LQ9UNN4 478 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 H0YCG3 227 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 FDPSP14324 419 aaKnown RBP13.74□□□□□ -0.21
CCBE1-201ENST00000398179 SYT1P21579 422 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 SOX5P35711 763 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 CCDC149Q6ZUS6 474 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 SSH3Q8TE77 659 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 CAPSLQ8WWF8 208 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 NAPGQ99747 312 aaPredicted RBP13.74□□□□□ -0.21
CCBE1-201ENST00000398179 GPCPD1Q9NPB8 672 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 POLIQ9UNA4 740 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 SPAG7O75391 227 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 FXNQ16595 210 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 ADAM21Q9UKJ8 722 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 TTC7AQ9ULT0 858 aaPredicted RBP13.74□□□□□ -0.21
CCBE1-201ENST00000398179 TRAF3IP3Q9Y228 551 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 RPH3AQ9Y2J0 694 aaPredicted RBP13.74□□□□□ -0.21
CCBE1-201ENST00000398179 XRCC5P13010 732 aaKnown RBP13.74□□□□□ -0.21
CCBE1-201ENST00000398179 LGALS3BPQ08380 585 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 TRIM32Q13049 653 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 DGLUCYQ7Z3D6 616 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 AOPEPQ8N6M6 819 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 C10orf53Q8N6V4 93 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 PPP2R3CQ969Q6 453 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 CIDECQ96AQ7 238 aaPredicted RBP13.74□□□□□ -0.21
CCBE1-201ENST00000398179 KIFC1Q9BW19 673 aa13.74□□□□□ -0.21
CCBE1-201ENST00000398179 E2F3O00716 465 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 TRAP1Q12931 704 aaKnown RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 C10orf62Q5T681 223 aaPredicted RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 ANKRD13CQ8N6S4 541 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 CEP295NLQ96MC4 621 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 CNOT10Q9H9A5 744 aaKnown RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 PNMA6AP0CW24 399 aaPredicted RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 AHI1Q8N157 1196 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 GRK7Q8WTQ7 553 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 CYLC1P35663 651 aaPredicted RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 CCDC157Q569K6 752 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 FBXW10Q5XX13 1052 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 TMIEQ8NEW7 156 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 PDGFDQ9GZP0 370 aaPredicted RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 NPIPA7E9PJI5 369 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 NPIPA8P0DM63 369 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 HSPD1P10809 573 aaKnown RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 PLS3P13797 630 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 CEBPGP53567 150 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
CCBE1-201ENST00000398179 APOL3O95236 402 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 DEPDC7Q96QD5 511 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 ROGDIQ9GZN7 287 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 CTNNAL1Q9UBT7 734 aa13.73□□□□□ -0.21
CCBE1-201ENST00000398179 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 SSX5O60225 188 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 PSIP1O75475 530 aaKnown RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 OSBPP22059 807 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 SLC9A3P48764 834 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 CCT3P49368 545 aaKnown RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 CCDC103Q8IW40 242 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 SPATA5Q8NB90 893 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 LPIN2Q92539 896 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 DACH2Q96NX9 599 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 KLHL1Q9NR64 748 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 SETD4Q9NVD3 440 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 DDX56Q9NY93 547 aaKnown RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 TXNDC16Q9P2K2 825 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 SLC8A2Q9UPR5 921 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 N6AMT1Q9Y5N5 214 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 MATN2O00339 956 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 STX7O15400 261 aaKnown RBP13.72□□□□□ -0.21
CCBE1-201ENST00000398179 IGHDP01880 384 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 ZNF24P17028 368 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 UBE3AQ05086 875 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 APOBRQ0VD83 1088 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 MOGSQ13724 837 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 MORF4L2Q15014 288 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 GRPEL2Q8TAA5 225 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 ORC6Q9Y5N6 252 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 IFNA14P01570 189 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 RAD23BP54727 409 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 WNK4Q96J92 1243 aa13.72□□□□□ -0.21
CCBE1-201ENST00000398179 CLEC4MQ9H2X3 399 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms