RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 PCYT2Q99447 389 aa21.27■■□□□ 1
COLCA2-201ENST00000398035 WNT8AQ9H1J5 351 aa21.27■■□□□ 1
COLCA2-201ENST00000398035 ZNF302Q9NR11 478 aa21.27■■□□□ 1
COLCA2-201ENST00000398035 SAMM50Q9Y512 469 aa21.27■■□□□ 1
COLCA2-201ENST00000398035 SCN10AQ9Y5Y9 1956 aa21.26■□□□□ 0.99
COLCA2-201ENST00000398035 TDP2O95551 362 aa21.26■□□□□ 0.99
COLCA2-201ENST00000398035 JAK3P52333 1124 aa21.26■□□□□ 0.99
COLCA2-201ENST00000398035 PPFIA1Q13136 1202 aa21.26■□□□□ 0.99
COLCA2-201ENST00000398035 SWSAP1Q6NVH7 229 aa21.26■□□□□ 0.99
COLCA2-201ENST00000398035 TAF2Q6P1X5 1199 aa21.26■□□□□ 0.99
COLCA2-201ENST00000398035 TNFRSF25Q93038 417 aa21.26■□□□□ 0.99
COLCA2-201ENST00000398035 FOXP1Q9H334 677 aaPredicted RBP21.26■□□□□ 0.99
COLCA2-201ENST00000398035 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.26■□□□□ 0.99
COLCA2-201ENST00000398035 UMODL1Q5DID0 1318 aa21.26■□□□□ 0.99
COLCA2-201ENST00000398035 POTEB3A0JP26 581 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 MARCH6O60337 910 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 BAG4O95429 457 aaKnown RBP21.25■□□□□ 0.99
COLCA2-201ENST00000398035 CKBP12277 381 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 EPHB4P54760 987 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 ADAM17P78536 824 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 ZNF200P98182 395 aaPredicted RBP21.25■□□□□ 0.99
COLCA2-201ENST00000398035 TMEM240Q5SV17 173 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 GPR153Q6NV75 609 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 PDXDC2PQ6P474 469 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 POTEBQ6S5H4 581 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 C16orf59Q7L2K0 433 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 RNPC3Q96LT9 517 aaKnown RBP21.25■□□□□ 0.99
COLCA2-201ENST00000398035 DISC1Q9NRI5 854 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 TRPC6Q9Y210 931 aa21.25■□□□□ 0.99
COLCA2-201ENST00000398035 MAFBQ9Y5Q3 323 aaPredicted RBP21.25■□□□□ 0.99
COLCA2-201ENST00000398035 TREHO43280 583 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 HBP1O60381 514 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 PSMD10O75832 226 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 MARK3P27448 753 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 FXR1P51114 621 aaKnown RBP eCLIP21.24■□□□□ 0.99
COLCA2-201ENST00000398035 GNL2Q13823 731 aaKnown RBP21.24■□□□□ 0.99
COLCA2-201ENST00000398035 GRIK4Q16099 956 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 C9orf50Q5SZB4 431 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 ZNF365Q70YC5 407 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 LRRC8DQ7L1W4 858 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 RSPH3Q86UC2 560 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 LMBR1Q8WVP7 490 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 SCLYQ96I15 445 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.24■□□□□ 0.99
COLCA2-201ENST00000398035 PCDH10Q9P2E7 1040 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 DNAH12Q6ZR08 3092 aa21.24■□□□□ 0.99
COLCA2-201ENST00000398035 ACTN1P12814 892 aa21.23■□□□□ 0.99
COLCA2-201ENST00000398035 INSRRP14616 1297 aa21.23■□□□□ 0.99
COLCA2-201ENST00000398035 PLCB4Q15147 1175 aa21.23■□□□□ 0.99
COLCA2-201ENST00000398035 RPAINQ86UA6 219 aa21.23■□□□□ 0.99
COLCA2-201ENST00000398035 SLFN12Q8IYM2 578 aa21.23■□□□□ 0.99
COLCA2-201ENST00000398035 ETNPPLQ8TBG4 499 aa21.23■□□□□ 0.99
COLCA2-201ENST00000398035 HERVK_113Q902F9 699 aa21.23■□□□□ 0.99
COLCA2-201ENST00000398035 DHX38Q92620 1227 aaKnown RBP21.23■□□□□ 0.99
COLCA2-201ENST00000398035 KCNMB3Q9NPA1 279 aa21.23■□□□□ 0.99
COLCA2-201ENST00000398035 MBLAC1A4D2B0 266 aaPredicted RBP21.22■□□□□ 0.99
COLCA2-201ENST00000398035 ACRP10323 421 aa21.22■□□□□ 0.99
COLCA2-201ENST00000398035 THPOP40225 353 aa21.22■□□□□ 0.99
COLCA2-201ENST00000398035 HIC1Q14526 733 aa21.22■□□□□ 0.99
COLCA2-201ENST00000398035 TRIM71Q2Q1W2 868 aaKnown RBP21.22■□□□□ 0.99
COLCA2-201ENST00000398035 CCDC60Q8IWA6 550 aaPredicted RBP21.22■□□□□ 0.99
COLCA2-201ENST00000398035 CKAP2LQ8IYA6 745 aa21.22■□□□□ 0.99
COLCA2-201ENST00000398035 ATP8B4Q8TF62 1192 aa21.22■□□□□ 0.99
COLCA2-201ENST00000398035 BBXQ8WY36 941 aaPredicted RBP21.22■□□□□ 0.99
COLCA2-201ENST00000398035 FAM167AQ96KS9 214 aa21.22■□□□□ 0.99
COLCA2-201ENST00000398035 UIMC1Q96RL1 719 aa21.22■□□□□ 0.99
COLCA2-201ENST00000398035 NRBP2Q9NSY0 501 aa21.22■□□□□ 0.99
COLCA2-201ENST00000398035 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.21■□□□□ 0.99
COLCA2-201ENST00000398035 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.21■□□□□ 0.99
COLCA2-201ENST00000398035 RSPH10B2B2RC85 870 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 RSPH10BP0C881 870 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 FOSBP53539 338 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 EARS2Q5JPH6 523 aaKnown RBP21.21■□□□□ 0.99
COLCA2-201ENST00000398035 ZNF484Q5JVG2 852 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 MIER3Q7Z3K6 550 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 FTOQ9C0B1 505 aaKnown RBP eCLIP21.21■□□□□ 0.99
COLCA2-201ENST00000398035 TUBE1Q9UJT0 475 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 CEP131Q9UPN4 1083 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 SLC37A4O43826 429 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 CD2BP2O95400 341 aaKnown RBP21.21■□□□□ 0.99
COLCA2-201ENST00000398035 GUCY1B3Q02153 619 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 ORC2Q13416 577 aaPredicted RBP21.21■□□□□ 0.99
COLCA2-201ENST00000398035 ZNF618Q5T7W0 954 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 DEFB128Q7Z7B8 93 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 UNC45AQ9H3U1 944 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 GABBR1Q9UBS5 961 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 SMC3Q9UQE7 1217 aa21.21■□□□□ 0.99
COLCA2-201ENST00000398035 DKC1O60832 514 aaKnown RBP eCLIP21.2■□□□□ 0.98
COLCA2-201ENST00000398035 TRAPPC10P48553 1259 aa21.2■□□□□ 0.98
COLCA2-201ENST00000398035 SMAD3P84022 425 aaKnown RBP21.2■□□□□ 0.98
COLCA2-201ENST00000398035 PPP2R5CQ13362 524 aa21.2■□□□□ 0.98
COLCA2-201ENST00000398035 MARCH8Q5T0T0 291 aa21.2■□□□□ 0.98
COLCA2-201ENST00000398035 RASIP1Q5U651 963 aa21.2■□□□□ 0.98
COLCA2-201ENST00000398035 B3GNT9Q6UX72 402 aa21.2■□□□□ 0.98
COLCA2-201ENST00000398035 NME8Q8N427 588 aa21.2■□□□□ 0.98
COLCA2-201ENST00000398035 COL1A2P08123 1366 aa21.19■□□□□ 0.98
COLCA2-201ENST00000398035 CHMP2AO43633 222 aa21.19■□□□□ 0.98
COLCA2-201ENST00000398035 CXCL10P02778 98 aa21.19■□□□□ 0.98
COLCA2-201ENST00000398035 U2AF2P26368 475 aaKnown RBP eCLIP21.19■□□□□ 0.989e-11■■■■□ 20.3
COLCA2-201ENST00000398035 IGBP1P78318 339 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms