RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ANP32AP39687 249 aaKnown RBP28.58■■■□□ 2.16
TMEM55B-202ENST00000398020 FAM160B1Q5W0V3 765 aa28.58■■■□□ 2.16
TMEM55B-202ENST00000398020 TRMT1LQ7Z2T5 733 aaKnown RBP28.58■■■□□ 2.16
TMEM55B-202ENST00000398020 ANKRD33Q7Z3H0 272 aa28.58■■■□□ 2.16
TMEM55B-202ENST00000398020 FAM126BQ8IXS8 530 aa28.58■■■□□ 2.16
TMEM55B-202ENST00000398020 FTOQ9C0B1 505 aaKnown RBP eCLIP28.58■■■□□ 2.16
TMEM55B-202ENST00000398020 ZSCAN16Q9H4T2 348 aaPredicted RBP28.58■■■□□ 2.16
TMEM55B-202ENST00000398020 PDXDC2PQ6P474 469 aa28.57■■■□□ 2.16
TMEM55B-202ENST00000398020 PLPPR4Q7Z2D5 763 aa28.57■■■□□ 2.16
TMEM55B-202ENST00000398020 MROH7Q68CQ1 1323 aa28.57■■■□□ 2.16
TMEM55B-202ENST00000398020 B4GALT4O60513 344 aa28.56■■■□□ 2.16
TMEM55B-202ENST00000398020 SMIM10L2AP0DMW4 78 aa28.56■■■□□ 2.16
TMEM55B-202ENST00000398020 SMIM10L2BP0DMW5 78 aa28.56■■■□□ 2.16
TMEM55B-202ENST00000398020 HIC1Q14526 733 aa28.56■■■□□ 2.16
TMEM55B-202ENST00000398020 UGCGQ16739 394 aa28.56■■■□□ 2.16
TMEM55B-202ENST00000398020 AFAP1L1Q8TED9 768 aa28.56■■■□□ 2.16
TMEM55B-202ENST00000398020 POTEMA6NI47 508 aa28.55■■■□□ 2.16
TMEM55B-202ENST00000398020 DCDC2CA8MYV0 355 aa28.55■■■□□ 2.16
TMEM55B-202ENST00000398020 TECP42680 631 aa28.55■■■□□ 2.16
TMEM55B-202ENST00000398020 FAAP100Q0VG06 881 aa28.55■■■□□ 2.16
TMEM55B-202ENST00000398020 GDF6Q6KF10 455 aaPredicted RBP28.55■■■□□ 2.16
TMEM55B-202ENST00000398020 GTF2IRD1Q9UHL9 959 aa28.55■■■□□ 2.16
TMEM55B-202ENST00000398020 WDR81Q562E7 1941 aa28.55■■■□□ 2.16
TMEM55B-202ENST00000398020 ZNF200P98182 395 aaPredicted RBP28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 PLCB4Q15147 1175 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 FOXD4L6Q3SYB3 417 aaPredicted RBP28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 FOXD4L3Q6VB84 417 aaPredicted RBP28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 CKAP2LQ8IYA6 745 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 BANK1Q8NDB2 785 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 TOX2Q96NM4 488 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 PRDM5Q9NQX1 630 aaPredicted RBP28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 SETD4Q9NVD3 440 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 TRPC6Q9Y210 931 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 MAFBQ9Y5Q3 323 aaPredicted RBP28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 PDE4DIPQ5VU43 2346 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 F13A1P00488 732 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 PDIA4P13667 645 aaKnown RBP28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 ATP4AP20648 1035 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 SF3A1Q15459 793 aaKnown RBP28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 SH3RF1Q7Z6J0 888 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 RDM1Q8NG50 284 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 SEZ6LQ9BYH1 1024 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 CLIC4Q9Y696 253 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 IGSF9BQ9UPX0 1349 aa28.54■■■□□ 2.16
TMEM55B-202ENST00000398020 MYH9P35579 1960 aaKnown RBP28.53■■■□□ 2.16
TMEM55B-202ENST00000398020 CD4P01730 458 aa28.53■■■□□ 2.16
TMEM55B-202ENST00000398020 SYN1P17600 705 aa28.53■■■□□ 2.16
TMEM55B-202ENST00000398020 CEBPZQ03701 1054 aaKnown RBP28.53■■■□□ 2.16
TMEM55B-202ENST00000398020 PTPN11Q06124 597 aaPredicted RBP28.53■■■□□ 2.16
TMEM55B-202ENST00000398020 SESTD1Q86VW0 696 aa28.53■■■□□ 2.16
TMEM55B-202ENST00000398020 DAXXQ9UER7 740 aaPredicted RBP28.53■■■□□ 2.16
TMEM55B-202ENST00000398020 ZMYND8Q9ULU4 1186 aaPredicted RBP28.53■■■□□ 2.16
TMEM55B-202ENST00000398020 TLR3O15455 904 aaKnown RBP28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 ZNF862O60290 1169 aa28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 CLTBP09497 229 aa28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 ATP2C1P98194 919 aaPredicted RBP28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 PTGISQ16647 500 aa28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 PDLIM7Q9NR12 457 aa28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 NOD1Q9Y239 953 aa28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 ZDHHC9Q9Y397 364 aa28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 CEP290O15078 2479 aa28.52■■■□□ 2.16
TMEM55B-202ENST00000398020 POTEB3A0JP26 581 aa28.51■■■□□ 2.16
TMEM55B-202ENST00000398020 C17orf102A2RUQ5 167 aa28.51■■■□□ 2.16
TMEM55B-202ENST00000398020 SLC26A2P50443 739 aa28.51■■■□□ 2.16
TMEM55B-202ENST00000398020 IGBP1P78318 339 aa28.51■■■□□ 2.16
TMEM55B-202ENST00000398020 PPFIA1Q13136 1202 aa28.51■■■□□ 2.16
TMEM55B-202ENST00000398020 IL17AQ16552 155 aa28.51■■■□□ 2.16
TMEM55B-202ENST00000398020 POTEBQ6S5H4 581 aa28.51■■■□□ 2.16
TMEM55B-202ENST00000398020 RGL1Q9NZL6 768 aa28.51■■■□□ 2.16
TMEM55B-202ENST00000398020 LAD1O00515 517 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 CYP2C9P11712 490 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 CYP4A11Q02928 519 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 EPHA7Q15375 998 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 TMEM266Q2M3C6 531 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 LMBR1Q8WVP7 490 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 DYDC2Q96IM9 177 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 CTAGE1Q96RT6 745 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 TMEM39AQ9NV64 488 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 TRIP12Q14669 1992 aaPredicted RBP28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 MYH15Q9Y2K3 1946 aa28.51■■■□□ 2.15
TMEM55B-202ENST00000398020 INSRRP14616 1297 aa28.5■■■□□ 2.15
TMEM55B-202ENST00000398020 PRKCEQ02156 737 aa28.5■■■□□ 2.15
TMEM55B-202ENST00000398020 ATP8B4Q8TF62 1192 aa28.5■■■□□ 2.15
TMEM55B-202ENST00000398020 TRAPPC12Q8WVT3 735 aa28.5■■■□□ 2.15
TMEM55B-202ENST00000398020 ZBTB10Q96DT7 871 aa28.5■■■□□ 2.15
TMEM55B-202ENST00000398020 USP28Q96RU2 1077 aa28.5■■■□□ 2.15
TMEM55B-202ENST00000398020 EIF2AK1Q9BQI3 630 aaKnown RBP28.5■■■□□ 2.15
TMEM55B-202ENST00000398020 NR2E3Q9Y5X4 410 aa28.5■■■□□ 2.15
TMEM55B-202ENST00000398020 TRIM43BA6NCK2 446 aa28.49■■■□□ 2.15
TMEM55B-202ENST00000398020 BRD1O95696 1058 aa28.49■■■□□ 2.15
TMEM55B-202ENST00000398020 GRIK4Q16099 956 aa28.49■■■□□ 2.15
TMEM55B-202ENST00000398020 ATP6V0A1Q93050 837 aa28.49■■■□□ 2.15
TMEM55B-202ENST00000398020 TRIM43Q96BQ3 446 aaPredicted RBP28.49■■■□□ 2.15
TMEM55B-202ENST00000398020 WRAP73Q9P2S5 460 aaPredicted RBP28.49■■■□□ 2.15
TMEM55B-202ENST00000398020 NRCAMQ92823 1304 aa28.49■■■□□ 2.15
TMEM55B-202ENST00000398020 TREHO43280 583 aa28.48■■■□□ 2.15
TMEM55B-202ENST00000398020 HOXC8P31273 242 aa28.48■■■□□ 2.15
TMEM55B-202ENST00000398020 PRPHP41219 470 aa28.48■■■□□ 2.15
TMEM55B-202ENST00000398020 FXR2P51116 673 aaKnown RBP eCLIP28.48■■■□□ 2.15
TMEM55B-202ENST00000398020 CTTNQ14247 550 aaKnown RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms