RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SSR1P43307 286 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 GUCY2FP51841 1108 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 GUCY2DQ02846 1103 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 NBPF9Q3BBW0 867 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 PPP4R3AQ6IN85 833 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 C1orf131Q8NDD1 294 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 GJA10Q969M2 543 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 CEP95Q96GE4 821 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 EPB41L5Q9HCM4 733 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 ETAA1Q9NY74 926 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 TBC1D7Q9P0N9 293 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 PACSIN2Q9UNF0 486 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 SNED1Q8TER0 1413 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 E7EVH7 732 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 TLR2O60603 784 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 HEXIM1O94992 359 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 SLC9C1Q4G0N8 1177 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 CFAP58Q5T655 872 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 IFT20Q8IY31 132 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 CYFIP2Q96F07 1278 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 UIMC1Q96RL1 719 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 LSM14BQ9BX40 385 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 ABCB11O95342 1321 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 TRAF5O00463 557 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 RPSAP08865 295 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 FXR2P51116 673 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 POLR2FP61218 127 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 XRCC4Q13426 336 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 ANKRD20A8PQ5CZ79 823 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 SFMBT2Q5VUG0 894 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 CD302Q8IX05 232 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 TRPC5Q9UL62 973 aaPredicted RBP17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 SSU72P8A0A1W2PR75 194 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 MGRN1O60291 552 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 ECM1Q16610 540 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 KRT79Q5XKE5 535 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 MYOCDQ8IZQ8 938 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 KIRREL3Q8IZU9 778 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 IQCKQ8N0W5 287 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 CERKQ8TCT0 537 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 KRT12Q99456 494 aa17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHMP1A-201ENST00000397901 DNM1LO00429 736 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 EDIL3O43854 480 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 PPP1R12BO60237 982 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 NOL4O94818 638 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 GYS1P13807 737 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 TNNI2P48788 182 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 GSTO1P78417 241 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 C15orf52Q6ZUT6 534 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 RNF10Q8N5U6 811 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 TBC1D5Q92609 795 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 FGFBP2Q9BYJ0 223 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 COL4A3BPQ9Y5P4 624 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 HMGB1P1B2RPK0 211 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 SKAP2O75563 359 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 KLRC1P26715 233 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 BTDP43251 543 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 NT5C2P49902 561 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 COASYQ13057 564 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 TRADDQ15628 312 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 CRY2Q49AN0 593 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 GLE1Q53GS7 698 aaKnown RBP17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 LACTB2Q53H82 288 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 CDCA2Q69YH5 1023 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 NELFCDQ8IXH7 590 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 NEDD1Q8NHV4 660 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 OSBPL7Q9BZF2 842 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 KIF9Q9HAQ2 790 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 GDF3Q9NR23 364 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 CEP72Q9P209 647 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 NAV1Q8NEY1 1877 aa17.48■□□□□ 0.39
CHMP1A-201ENST00000397901 ZNF233A6NK53 670 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 SERPING1P05155 500 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 PPP4CP60510 307 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 EHHADHQ08426 723 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 RAPGEF1Q13905 1077 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 C16orf86Q6ZW13 317 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 P3H4Q92791 437 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 SPDL1Q96EA4 605 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 CALR3Q96L12 384 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 ATP6V1G3Q96LB4 118 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 PACSIN1Q9BY11 444 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 RAB34Q9BZG1 259 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 RIC8AQ9NPQ8 531 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 TSKSQ9UJT2 592 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 ADCY7P51828 1080 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 RWDD2BP57060 319 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 FKBP3Q00688 224 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 PAK2Q13177 524 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 ARFGAP2Q8N6H7 521 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 HOMER3Q9NSC5 361 aa17.47■□□□□ 0.39
CHMP1A-201ENST00000397901 RBAK-RBAKDNI3L0D1 243 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 HSPA1LP34931 641 aa17.46■□□□□ 0.39
CHMP1A-201ENST00000397901 SCTRP47872 440 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms