RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 TMCO1Q9UM00 188 aa12.55□□□□□ -0.4
PUM3-202ENST00000397885 BCORQ6W2J9 1755 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 RANBP6O60518 1105 aaKnown RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 UBOX5O94941 541 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 SP100P23497 879 aaPredicted RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 PDE6BP35913 854 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 MMP13P45452 471 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 PDE6CP51160 858 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 HLTFQ14527 1009 aaKnown RBP eCLIP12.54□□□□□ -0.4
PUM3-202ENST00000397885 TSNAXIP1Q2TAA8 658 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 IRGCQ6NXR0 463 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 CROCCP2Q86T23 111 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 LCA5Q86VQ0 697 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 ERGIC2Q96RQ1 377 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.54□□□□□ -0.4
PUM3-202ENST00000397885 PCMTD2Q9NV79 361 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 ATXN10Q9UBB4 475 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 BACH1O14867 736 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 RAD51CO43502 376 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 OAS1P00973 400 aaKnown RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 MMEP08473 750 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 KRT16P08779 473 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 CALB2P22676 271 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 KIF11P52732 1056 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 DALRD3Q5D0E6 543 aaKnown RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 ARHGAP18Q8N392 663 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 SYMPKQ92797 1274 aaKnown RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 RBM17Q96I25 401 aaKnown RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 INPP4AQ96PE3 977 aaPredicted RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 MMADHCQ9H3L0 296 aaPredicted RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 RNPEPL1Q9HAU8 725 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 DNAAF2Q9NVR5 837 aaKnown RBP12.54□□□□□ -0.4
PUM3-202ENST00000397885 VPS54Q9P1Q0 977 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 CTTNBP2NLQ9P2B4 639 aa12.54□□□□□ -0.4
PUM3-202ENST00000397885 XDHP47989 1333 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 RGL2O15211 777 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 FOXP2O15409 715 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 SNX3O60493 162 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 NLRP5P59047 1200 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 USP4Q13107 963 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 PARP6Q2NL67 630 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 KRT71Q3SY84 523 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 TBC1D9BQ66K14 1250 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 OR52E8Q6IFG1 317 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 TMEM154Q6P9G4 183 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 ADSSL1Q8N142 457 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 OR2W6PQ8NHA6 318 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 PRCCQ92733 491 aaPredicted RBP12.53□□□□□ -0.4
PUM3-202ENST00000397885 PGM2Q96G03 612 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 EPSTI1Q96J88 318 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 FGD4Q96M96 766 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 VCX3BQ9H321 246 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 PIDD1Q9HB75 910 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 VCX3AQ9NNX9 186 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 GOLGA8AA7E2F4 631 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 MYL1P05976 194 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 CCNB1P14635 433 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 MAGEA1P43355 309 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 ERVK-9P63128 1117 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 PLS1Q14651 629 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 MYBPC3Q14896 1274 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.53□□□□□ -0.4
PUM3-202ENST00000397885 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 PSMB7Q99436 277 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 TRIM7Q9C029 511 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
PUM3-202ENST00000397885 ABCF3Q9NUQ8 709 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 ZNF232Q9UNY5 417 aa12.53□□□□□ -0.4
PUM3-202ENST00000397885 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
PUM3-202ENST00000397885 NCK2O43639 380 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 SUN1O94901 812 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 CHN1P15882 459 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 CASP1P29466 404 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 LIFRP42702 1097 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 PRCPP42785 496 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 PEX5P50542 639 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 TRIM68Q6AZZ1 485 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 KRT26Q7Z3Y9 468 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 MYLK4Q86YV6 388 aaPredicted RBP12.52□□□□□ -0.41
PUM3-202ENST00000397885 FAM114A1Q8IWE2 563 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 ZSCAN29Q8IWY8 852 aaPredicted RBP12.52□□□□□ -0.41
PUM3-202ENST00000397885 LRRC34Q8IZ02 419 aa12.52□□□□□ -0.41
PUM3-202ENST00000397885 ENDOVQ8N8Q3 282 aaKnown RBP12.52□□□□□ -0.41
PUM3-202ENST00000397885 UBLCP1Q8WVY7 318 aaPredicted RBP12.52□□□□□ -0.41
PUM3-202ENST00000397885 SETDB2Q96T68 719 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms