RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ENOX2Q16206 610 aaKnown RBP20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SRLQ86TD4 932 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SFR1Q86XK3 245 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 PRR12Q9ULL5 1215 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SNX12Q9UMY4 172 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 LRRIQ3A6PVS8 624 aaPredicted RBP20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 YDJCA8MPS7 323 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RSPH10B2B2RC85 870 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 TCP10L2B9ZVM9 353 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 BUB1O43683 1085 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RSPH10BP0C881 870 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 GOLGA6L1Q8N7Z2 621 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ERMNQ8TAM6 284 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RRP15Q9Y3B9 282 aaKnown RBP20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 PITPNM2Q9BZ72 1349 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 NPM3O75607 178 aaKnown RBP20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 HMGB2P26583 209 aaKnown RBP20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ZNF76P36508 570 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 KIAA1755Q5JYT7 1200 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SFMBT2Q5VUG0 894 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 STYK1Q6J9G0 422 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CREG2Q8IUH2 290 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SYT2Q8N9I0 419 aaPredicted RBP20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 TBC1D5Q92609 795 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 BHMT2Q9H2M3 363 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RGL1Q9NZL6 768 aa20.2■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CLRN2A0PK11 232 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 TBX3O15119 743 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 NCK2O43639 380 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 PRPF6O94906 941 aaKnown RBP20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 GNA14O95837 355 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 NFRKBQ6P4R8 1299 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 GDAP1L1Q96MZ0 367 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EDEM3Q9BZQ6 932 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EML1O00423 815 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CETN3O15182 167 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 FOSP01100 380 aaPredicted RBP20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 TUBBP07437 444 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 MYBP10242 640 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 HOXD13P35453 343 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EPS15P42566 896 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 MARSP56192 900 aaKnown RBP20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 KCNH2Q12809 1159 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SLC9C1Q4G0N8 1177 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ACER1Q8TDN7 264 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SMARCAL1Q9NZC9 954 aa20.19■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ENTPD3O75355 529 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RAPGEF1Q13905 1077 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 GSPT2Q8IYD1 628 aaKnown RBP20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RPGRIP1Q96KN7 1286 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EHD2Q9NZN4 543 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 VAV3Q9UKW4 847 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ZNF646O15015 1829 aaPredicted RBP20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ATRNL1Q5VV63 1379 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SSU72P8A0A1W2PR75 194 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CFBP00751 764 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 NAP1L1P55209 391 aaKnown RBP20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CC2D2BQ6DHV5 1058 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SAMD1Q6SPF0 538 aaPredicted RBP20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 FAM20AQ96MK3 541 aa20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.18■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SFI1A8K8P3 1242 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 PPIP5K2O43314 1243 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ACTN1P12814 892 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 UBXN2AP68543 259 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 MRPS25P82663 173 aaKnown RBP20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 FAM133AQ8N9E0 248 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ALS2CR12Q96Q35 445 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RUSC1Q9BVN2 902 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 KNOP1Q1ED39 458 aaKnown RBP20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EDRF1Q3B7T1 1238 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 BTNL9Q6UXG8 535 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 PIGOQ8TEQ8 1089 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 C7orf43Q8WVR3 580 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 OSBPL9Q96SU4 736 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EIF2AK1Q9BQI3 630 aaKnown RBP20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 VPS18Q9P253 973 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ADAM21Q9UKJ8 722 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 PJA2O43164 708 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SLC26A4O43511 780 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EIF3JO75822 258 aaKnown RBP20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SERPING1P05155 500 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 MYBL2P10244 700 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CIITAP33076 1130 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 MATR3P43243 847 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 STAT2P52630 851 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 KCNA1Q09470 495 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CCDC174Q6PII3 467 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 BANK1Q8NDB2 785 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CCDC102AQ96A19 550 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 HDAC9Q9UKV0 1011 aa20.17■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CHMP2AO43633 222 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 PHACTR2O75167 634 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 POLD1P28340 1107 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CTTNQ14247 550 aaKnown RBP20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EZH2Q15910 746 aaKnown RBP20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 MCTP2Q6DN12 878 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ZC3H3Q8IXZ2 948 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms