RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PCDHA10Q9Y5I2 948 aa21.76■■□□□ 1.07
PDLIM2-205ENST00000397761 PVALEFA0A1B0GWK0 134 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 RBM47A0AV96 593 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 RHOBTB3O94955 611 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 ATG7O95352 703 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 QARSP47897 775 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 MAP2K5Q13163 448 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 GRM1Q13255 1194 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 NEDD9Q14511 834 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 UVSSAQ2YD98 709 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 CT47A1Q5JQC4 288 aaPredicted RBP21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 DPP9Q86TI2 863 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 RNF214Q8ND24 703 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 DNAJC19Q96DA6 116 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 KATNBL1Q9H079 304 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 CBX8Q9HC52 389 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 SLC5A4Q9NY91 659 aa21.75■■□□□ 1.07
PDLIM2-205ENST00000397761 SYNGAP1Q96PV0 1343 aa21.74■■□□□ 1.07
PDLIM2-205ENST00000397761 FARP2O94887 1054 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-205ENST00000397761 ABHD15Q6UXT9 468 aa21.74■■□□□ 1.07
PDLIM2-205ENST00000397761 BANK1Q8NDB2 785 aa21.74■■□□□ 1.07
PDLIM2-205ENST00000397761 XRCC6P12956 609 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 CYP11B2P19099 503 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 ACTR2P61160 394 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 EHHADHQ08426 723 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 IRF5Q13568 498 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 DHX8Q14562 1220 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 KMT5BQ4FZB7 885 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 ARSHQ5FYA8 562 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 ISM2Q6H9L7 571 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 UNC13DQ70J99 1090 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 EEPD1Q7L9B9 569 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 FBXO16Q8IX29 292 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 C4orf19Q8IY42 314 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 NPLOC4Q8TAT6 608 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 SCFD2Q8WU76 684 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 DDX12PQ92771 950 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 GTPBP4Q9BZE4 634 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 SAMM50Q9Y512 469 aa21.73■■□□□ 1.07
PDLIM2-205ENST00000397761 ARIH2O95376 493 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 SNAI1O95863 264 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 IGHA2P01877 340 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 MAP2K2P36507 400 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 PSMC5P62195 406 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 ASIC1P78348 528 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 ZNF658Q5TYW1 1059 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 TAPT1Q6NXT6 567 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 METTL7BQ6UX53 244 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 CYFIP1Q7L576 1253 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 GPBP1Q86WP2 473 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 TINF2Q9BSI4 451 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 BHMT2Q9H2M3 363 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 DBR1Q9UK59 544 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 GJD2Q9UKL4 321 aa21.72■■□□□ 1.07
PDLIM2-205ENST00000397761 IGKV6D-21A0A0A0MT36 114 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 FRMD3A2A2Y4 597 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 PSAPP07602 524 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 UGCGQ16739 394 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 SOCS4Q8WXH5 440 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 BMP2KQ9NSY1 1161 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 DACH1Q9UI36 760 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 TELO2Q9Y4R8 837 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 GGPS1O95749 300 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 SUPT20HL2P0C7V6 817 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 HSPA1AP0DMV8 641 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 HSPA1BP0DMV9 641 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 CTGFP29279 349 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 TTLL4Q14679 1199 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 LUZP1Q86V48 1076 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 DHX40Q8IX18 779 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 PIGOQ8TEQ8 1089 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 CCDC47Q96A33 483 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 KCND2Q9NZV8 630 aa21.71■■□□□ 1.07
PDLIM2-205ENST00000397761 IGSF9BQ9UPX0 1349 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 PPP1R3GB7ZBB8 358 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 IKBKBO14920 756 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 ZBTB39O15060 712 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 DKC1O60832 514 aaKnown RBP eCLIP21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 STBD1O95210 358 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 SSBP05455 408 aaKnown RBP eCLIP21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 ERCC5P28715 1186 aaPredicted RBP21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 LY6KQ17RY6 165 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 COBLL1Q53SF7 1204 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 CELF3Q5SZQ8 465 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 RINT1Q6NUQ1 792 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 MIS18BP1Q6P0N0 1132 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 C1orf186Q6ZWK4 172 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 ATP6V0A1Q93050 837 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 ABHD16BQ9H3Z7 469 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 PDGFCQ9NRA1 345 aa21.7■■□□□ 1.06
PDLIM2-205ENST00000397761 GSTTP1A0A1W2PQM5 241 aa21.69■■□□□ 1.06
PDLIM2-205ENST00000397761 TNPO2O14787 897 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-205ENST00000397761 CD44P16070 742 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-205ENST00000397761 RGS2P41220 211 aa21.69■■□□□ 1.06
PDLIM2-205ENST00000397761 OLFML2BQ68BL8 750 aa21.69■■□□□ 1.06
PDLIM2-205ENST00000397761 DYMQ7RTS9 669 aa21.69■■□□□ 1.06
PDLIM2-205ENST00000397761 CCDC60Q8IWA6 550 aaPredicted RBP21.69■■□□□ 1.06
PDLIM2-205ENST00000397761 RUSC1Q9BVN2 902 aa21.69■■□□□ 1.06
PDLIM2-205ENST00000397761 ANKEF1Q9NU02 776 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms