RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 KCNA2P16389 499 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 PPFIA1Q13136 1202 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 XRRA1Q6P2D8 792 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 TSHZ1Q6ZSZ6 1077 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 PRSS33Q8NF86 280 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 DNAJB3Q8WWF6 145 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 EDAQ92838 391 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 P2RX5Q93086 422 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 IGFLR1Q9H665 355 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 CLEC1BQ9P126 229 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 TUBE1Q9UJT0 475 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 TAF6LQ9Y6J9 622 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 CACNA1HO95180 2353 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 GSTTP1A0A1W2PQM5 241 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 PIK3CDO00329 1044 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 ITGB1P05556 798 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 GRIK4Q16099 956 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 BMP8AQ7Z5Y6 402 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 ADGRD2Q7Z7M1 963 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 RTN4RL1Q86UN2 441 aaPredicted RBP18.55■□□□□ 0.56
CUX2-202ENST00000397643 SMRP1Q8NCR6 262 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 PIBF1Q8WXW3 757 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 CDY2AQ9Y6F7 541 aa18.55■□□□□ 0.56
CUX2-202ENST00000397643 IFIT3O14879 490 aaKnown RBP18.54■□□□□ 0.56
CUX2-202ENST00000397643 GLP2RO95838 553 aa18.54■□□□□ 0.56
CUX2-202ENST00000397643 CYP21A2P08686 494 aa18.54■□□□□ 0.56
CUX2-202ENST00000397643 MARK3P27448 753 aa18.54■□□□□ 0.56
CUX2-202ENST00000397643 CMTR2Q8IYT2 770 aaKnown RBP18.54■□□□□ 0.56
CUX2-202ENST00000397643 EFHBQ8N7U6 833 aa18.54■□□□□ 0.56
CUX2-202ENST00000397643 SPPL3Q8TCT6 385 aa18.54■□□□□ 0.56
CUX2-202ENST00000397643 ZBTB10Q96DT7 871 aa18.54■□□□□ 0.56
CUX2-202ENST00000397643 ERAP1Q9NZ08 941 aa18.54■□□□□ 0.56
CUX2-202ENST00000397643 LOC730098B7Z3J9 87 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 ITGB5P18084 799 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 CD52P31358 61 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 NDUFV1P49821 464 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 MRPS6P82932 125 aaKnown RBP18.53■□□□□ 0.56
CUX2-202ENST00000397643 TRDNQ13061 729 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 IER5LQ5T953 404 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 RSPH3Q86UC2 560 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 NLRX1Q86UT6 975 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 GIMAP8Q8ND71 665 aaPredicted RBP18.53■□□□□ 0.56
CUX2-202ENST00000397643 SMARCC2Q8TAQ2 1214 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 GPRASP2Q96D09 838 aa18.53■□□□□ 0.56
CUX2-202ENST00000397643 KMT2EQ8IZD2 1858 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 ANTXR2P58335 489 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 COASYQ13057 564 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 CBX2Q14781 532 aaPredicted RBP18.52■□□□□ 0.56
CUX2-202ENST00000397643 WTAPQ15007 396 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 NAALADL2Q58DX5 795 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 TRIM67Q6ZTA4 783 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 KLHL23Q8NBE8 558 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 SEPT1Q8WYJ6 367 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 SPZ1Q9BXG8 430 aa18.52■□□□□ 0.56
CUX2-202ENST00000397643 PLXNA4Q9HCM2 1894 aa18.52■□□□□ 0.55
CUX2-202ENST00000397643 TMEM221A6NGB7 291 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 M0R296 226 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 PTH1RQ03431 593 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 NPAS4Q8IUM7 802 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 POF1BQ8WVV4 589 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 PCYT2Q99447 389 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 PCDHGC5Q9Y5F6 944 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 SQORQ9Y6N5 450 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 LOXHD1Q8IVV2 1947 aa18.51■□□□□ 0.55
CUX2-202ENST00000397643 ERICH2A1L162 156 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 E7EWF7 191 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 GSPT1P15170 499 aaKnown RBP18.5■□□□□ 0.55
CUX2-202ENST00000397643 GATMP50440 423 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 ZXDAP98168 799 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 TCF15Q12870 199 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 PAN2Q504Q3 1202 aaKnown RBP18.5■□□□□ 0.55
CUX2-202ENST00000397643 CATIPQ7Z7H3 387 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 IGDCC4Q8TDY8 1250 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 GLG1Q92896 1179 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 CUL5Q93034 780 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 PPP2R3CQ969Q6 453 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 CDHR1Q96JP9 859 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 FTHL17Q9BXU8 183 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 FAM49AQ9H0Q0 323 aaPredicted RBP18.5■□□□□ 0.55
CUX2-202ENST00000397643 BARX2Q9UMQ3 279 aaPredicted RBP18.5■□□□□ 0.55
CUX2-202ENST00000397643 USP15Q9Y4E8 981 aaPredicted RBP18.5■□□□□ 0.55
CUX2-202ENST00000397643 UBIAD1Q9Y5Z9 338 aa18.5■□□□□ 0.55
CUX2-202ENST00000397643 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
CUX2-202ENST00000397643 IGSF9BQ9UPX0 1349 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 INSRRP14616 1297 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 NRIP1P48552 1158 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 IGBP1P78318 339 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 MB21D2Q8IYB1 491 aaPredicted RBP18.49■□□□□ 0.55
CUX2-202ENST00000397643 PBXIP1Q96AQ6 731 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 MAP3K14Q99558 947 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 MYL10Q9BUA6 226 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 TMX1Q9H3N1 280 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 SMARCAD1Q9H4L7 1026 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 PKD2L1Q9P0L9 805 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 PADI3Q9ULW8 664 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 TRPV2Q9Y5S1 764 aa18.49■□□□□ 0.55
CUX2-202ENST00000397643 RRN3P2A6NIE6 340 aa18.48■□□□□ 0.55
CUX2-202ENST00000397643 RPLP2P05387 115 aaKnown RBP18.48■□□□□ 0.55
CUX2-202ENST00000397643 SCG2P13521 617 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms