RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MORC3Q14149 939 aa30.72■■■□□ 2.51
CPNE1-203ENST00000397442 UGCGQ16739 394 aa30.72■■■□□ 2.51
CPNE1-203ENST00000397442 TRIM47Q96LD4 638 aa30.72■■■□□ 2.51
CPNE1-203ENST00000397442 ANO10Q9NW15 660 aa30.72■■■□□ 2.51
CPNE1-203ENST00000397442 FLRT1Q9NZU1 646 aa30.72■■■□□ 2.51
CPNE1-203ENST00000397442 RBM47A0AV96 593 aaKnown RBP30.71■■■□□ 2.51
CPNE1-203ENST00000397442 ZBTB39O15060 712 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 KLRC4O43908 158 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 TRPA1O75762 1119 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 QARSP47897 775 aaKnown RBP30.71■■■□□ 2.51
CPNE1-203ENST00000397442 SP4Q02446 784 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 TMEM63BQ5T3F8 832 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 CNNM4Q6P4Q7 775 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 ABHD15Q6UXT9 468 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 C11orf57Q6ZUT1 292 aaPredicted RBP30.71■■■□□ 2.51
CPNE1-203ENST00000397442 SCFD2Q8WU76 684 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 DNAJC25Q9H1X3 360 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 ZSWIM4Q9H7M6 989 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 GOLGA6L3A6NEY3 463 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 ATG7O95352 703 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 LYPLA2O95372 231 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 EYA4O95677 639 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 GGPS1O95749 300 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 IGHA2P01877 340 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 RPN1P04843 607 aaKnown RBP30.71■■■□□ 2.51
CPNE1-203ENST00000397442 RGS2P41220 211 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 PSMC4P43686 418 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 FCGRTP55899 365 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 METTL7BQ6UX53 244 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 SYT2Q8N9I0 419 aaPredicted RBP30.71■■■□□ 2.51
CPNE1-203ENST00000397442 TRIML1Q8N9V2 468 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 PIGOQ8TEQ8 1089 aa30.71■■■□□ 2.51
CPNE1-203ENST00000397442 CAP1Q01518 475 aa30.7■■■□□ 2.5
CPNE1-203ENST00000397442 TTLL4Q14679 1199 aa30.7■■■□□ 2.5
CPNE1-203ENST00000397442 NACC1Q96RE7 527 aa30.7■■■□□ 2.5
CPNE1-203ENST00000397442 APBA2Q99767 749 aa30.7■■■□□ 2.5
CPNE1-203ENST00000397442 TXNP10599 105 aaKnown RBP30.69■■■□□ 2.5
CPNE1-203ENST00000397442 CYP2B6P20813 491 aa30.69■■■□□ 2.5
CPNE1-203ENST00000397442 CCL14Q16627 93 aa30.69■■■□□ 2.5
CPNE1-203ENST00000397442 CELF3Q5SZQ8 465 aaKnown RBP30.69■■■□□ 2.5
CPNE1-203ENST00000397442 BHMT2Q9H2M3 363 aa30.69■■■□□ 2.5
CPNE1-203ENST00000397442 ABHD16BQ9H3Z7 469 aa30.69■■■□□ 2.5
CPNE1-203ENST00000397442 SSBP05455 408 aaKnown RBP eCLIP30.68■■■□□ 2.5
CPNE1-203ENST00000397442 PSAPP07602 524 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 CYP11B2P19099 503 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 PSMC5P62195 406 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 DDX12PQ92771 950 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 LRRC27Q9C0I9 530 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 SUPT20HL2P0C7V6 817 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 SP3Q02447 781 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 ARSHQ5FYA8 562 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 OLFML2BQ68BL8 750 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 GPBP1Q86WP2 473 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 CCDC60Q8IWA6 550 aaPredicted RBP30.68■■■□□ 2.5
CPNE1-203ENST00000397442 C4orf19Q8IY42 314 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 RNF214Q8ND24 703 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 COPS5Q92905 334 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 DNAJC19Q96DA6 116 aa30.68■■■□□ 2.5
CPNE1-203ENST00000397442 LOXHD1Q8IVV2 1947 aa30.67■■■□□ 2.5
CPNE1-203ENST00000397442 GSTTP1A0A1W2PQM5 241 aa30.67■■■□□ 2.5
CPNE1-203ENST00000397442 ASIC1P78348 528 aa30.67■■■□□ 2.5
CPNE1-203ENST00000397442 ACVR2BQ13705 512 aa30.67■■■□□ 2.5
CPNE1-203ENST00000397442 KCNB1Q14721 858 aa30.67■■■□□ 2.5
CPNE1-203ENST00000397442 DYMQ7RTS9 669 aa30.67■■■□□ 2.5
CPNE1-203ENST00000397442 IGKV6D-21A0A0A0MT36 114 aa30.66■■■□□ 2.5
CPNE1-203ENST00000397442 KMT5BQ4FZB7 885 aa30.66■■■□□ 2.5
CPNE1-203ENST00000397442 SWSAP1Q6NVH7 229 aa30.66■■■□□ 2.5
CPNE1-203ENST00000397442 MIS18BP1Q6P0N0 1132 aa30.66■■■□□ 2.5
CPNE1-203ENST00000397442 MLXIPQ9HAP2 919 aa30.66■■■□□ 2.5
CPNE1-203ENST00000397442 GABBR1Q9UBS5 961 aa30.66■■■□□ 2.5
CPNE1-203ENST00000397442 PCNTO95613 3336 aa30.66■■■□□ 2.5
CPNE1-203ENST00000397442 ZNF862O60290 1169 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 PTGS1P23219 599 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 ADCYAP1R1P41586 468 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 GABRQQ9UN88 632 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 RHOBTB3O94955 611 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 CAVIN2O95810 425 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 ZNF165P49910 485 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 FAM200AQ8TCP9 573 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 RMND1Q9NWS8 449 aa30.65■■■□□ 2.5
CPNE1-203ENST00000397442 IGSF9BQ9UPX0 1349 aa30.64■■■□□ 2.5
CPNE1-203ENST00000397442 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.64■■■□□ 2.5
CPNE1-203ENST00000397442 STBD1O95210 358 aa30.64■■■□□ 2.5
CPNE1-203ENST00000397442 HSDL1Q3SXM5 330 aa30.64■■■□□ 2.5
CPNE1-203ENST00000397442 DHX37Q8IY37 1157 aaKnown RBP30.64■■■□□ 2.5
CPNE1-203ENST00000397442 ATP6V0A1Q93050 837 aa30.64■■■□□ 2.5
CPNE1-203ENST00000397442 PCYT2Q99447 389 aa30.64■■■□□ 2.5
CPNE1-203ENST00000397442 RUSC1Q9BVN2 902 aa30.64■■■□□ 2.5
CPNE1-203ENST00000397442 GRPEL1Q9HAV7 217 aa30.64■■■□□ 2.5
CPNE1-203ENST00000397442 CBX8Q9HC52 389 aa30.64■■■□□ 2.5
CPNE1-203ENST00000397442 DBR1Q9UK59 544 aaKnown RBP30.64■■■□□ 2.5
CPNE1-203ENST00000397442 NPHP3-ACAD11A0A0J9YXS1 232 aa30.63■■■□□ 2.49
CPNE1-203ENST00000397442 PVALEFA0A1B0GWK0 134 aa30.63■■■□□ 2.49
CPNE1-203ENST00000397442 XRCC6P12956 609 aaKnown RBP eCLIP30.63■■■□□ 2.49
CPNE1-203ENST00000397442 XRCC5P13010 732 aaKnown RBP30.63■■■□□ 2.49
CPNE1-203ENST00000397442 YWHABP31946 246 aaKnown RBP30.63■■■□□ 2.49
CPNE1-203ENST00000397442 ARHGAP1Q07960 439 aa30.63■■■□□ 2.49
CPNE1-203ENST00000397442 IRF5Q13568 498 aa30.63■■■□□ 2.49
CPNE1-203ENST00000397442 GJC2Q5T442 439 aaPredicted RBP30.63■■■□□ 2.49
CPNE1-203ENST00000397442 RINT1Q6NUQ1 792 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms