RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 RDM1Q8NG50 284 aa18.18■□□□□ 0.5
RBM39-205ENST00000397370 TTC12Q9H892 705 aaPredicted RBP18.18■□□□□ 0.5
RBM39-205ENST00000397370 ZNF302Q9NR11 478 aa18.18■□□□□ 0.5
RBM39-205ENST00000397370 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.18■□□□□ 0.5
RBM39-205ENST00000397370 GTF2IRD1Q9UHL9 959 aa18.18■□□□□ 0.5
RBM39-205ENST00000397370 PCDHA12Q9UN75 941 aa18.18■□□□□ 0.5
RBM39-205ENST00000397370 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
RBM39-205ENST00000397370 TNRC18O15417 2968 aaPredicted RBP18.18■□□□□ 0.5
RBM39-205ENST00000397370 MYH15Q9Y2K3 1946 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 EML1O00423 815 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 CLTBP09497 229 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 OR52Z1P0C646 297 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 SMIM10L2AP0DMW4 78 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 SMIM10L2BP0DMW5 78 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 TXKP42681 527 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 SPIRE1Q08AE8 756 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 FAAP100Q0VG06 881 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 GDF6Q6KF10 455 aaPredicted RBP18.17■□□□□ 0.5
RBM39-205ENST00000397370 TRPV6Q9H1D0 765 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 TRMT13Q9NUP7 481 aaKnown RBP18.17■□□□□ 0.5
RBM39-205ENST00000397370 GABBR1Q9UBS5 961 aa18.17■□□□□ 0.5
RBM39-205ENST00000397370 MAFBQ9Y5Q3 323 aaPredicted RBP18.17■□□□□ 0.5
RBM39-205ENST00000397370 SLC26A2P50443 739 aa18.16■□□□□ 0.5
RBM39-205ENST00000397370 PTGDRQ13258 359 aa18.16■□□□□ 0.5
RBM39-205ENST00000397370 HIC1Q14526 733 aa18.16■□□□□ 0.5
RBM39-205ENST00000397370 PDXDC2PQ6P474 469 aa18.16■□□□□ 0.5
RBM39-205ENST00000397370 ZSCAN16Q9H4T2 348 aaPredicted RBP18.16■□□□□ 0.5
RBM39-205ENST00000397370 PDLIM7Q9NR12 457 aa18.16■□□□□ 0.5
RBM39-205ENST00000397370 IGSF9BQ9UPX0 1349 aa18.16■□□□□ 0.5
RBM39-205ENST00000397370 ATP4AP20648 1035 aa18.15■□□□□ 0.5
RBM39-205ENST00000397370 HOXC8P31273 242 aa18.15■□□□□ 0.5
RBM39-205ENST00000397370 PLCB4Q15147 1175 aa18.15■□□□□ 0.5
RBM39-205ENST00000397370 NCAPH2Q6IBW4 605 aa18.15■□□□□ 0.5
RBM39-205ENST00000397370 SH3RF1Q7Z6J0 888 aa18.15■□□□□ 0.5
RBM39-205ENST00000397370 PRDM5Q9NQX1 630 aaPredicted RBP18.15■□□□□ 0.5
RBM39-205ENST00000397370 TMEM39AQ9NV64 488 aa18.15■□□□□ 0.5
RBM39-205ENST00000397370 C17orf102A2RUQ5 167 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 TRIM43BA6NCK2 446 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 LAD1O00515 517 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 TECP42680 631 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 ZNF200P98182 395 aaPredicted RBP18.14■□□□□ 0.49
RBM39-205ENST00000397370 PKP1Q13835 747 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 EPHA7Q15375 998 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 PTGISQ16647 500 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 UGCGQ16739 394 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 FAM173BQ6P4H8 233 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 ATP8B4Q8TF62 1192 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 TRIM43Q96BQ3 446 aaPredicted RBP18.14■□□□□ 0.49
RBM39-205ENST00000397370 SETD4Q9NVD3 440 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 TBX21Q9UL17 535 aa18.14■□□□□ 0.49
RBM39-205ENST00000397370 ZMYND8Q9ULU4 1186 aaPredicted RBP18.14■□□□□ 0.49
RBM39-205ENST00000397370 POTEB3A0JP26 581 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 KIAA0355O15063 1070 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 ZNF862O60290 1169 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 HBP1O60381 514 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
RBM39-205ENST00000397370 GNAT1P11488 350 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 SYN1P17600 705 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 ATP2C1P98194 919 aaPredicted RBP18.13■□□□□ 0.49
RBM39-205ENST00000397370 PPFIA1Q13136 1202 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 FOXD4L5Q5VV16 416 aaPredicted RBP18.13■□□□□ 0.49
RBM39-205ENST00000397370 POTEBQ6S5H4 581 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 CKAP2LQ8IYA6 745 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 FOXD4L4Q8WXT5 416 aaPredicted RBP18.13■□□□□ 0.49
RBM39-205ENST00000397370 TNPO1Q92973 898 aaKnown RBP18.13■□□□□ 0.49
RBM39-205ENST00000397370 CTAGE1Q96RT6 745 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 PRKAG2Q9UGJ0 569 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 TRPC6Q9Y210 931 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 NOD1Q9Y239 953 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 LTBP2Q14767 1821 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 NRCAMQ92823 1304 aa18.13■□□□□ 0.49
RBM39-205ENST00000397370 POTEMA6NI47 508 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 F13A1P00488 732 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 P4HBP07237 508 aaKnown RBP18.12■□□□□ 0.49
RBM39-205ENST00000397370 CYP2C9P11712 490 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 INSRRP14616 1297 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 PRPHP41219 470 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.49
RBM39-205ENST00000397370 PSMC5P62195 406 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 ADAM17P78536 824 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 GRIK4Q16099 956 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 TMEM266Q2M3C6 531 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 BANK1Q8NDB2 785 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 LMBR1Q8WVP7 490 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 BBXQ8WY36 941 aaPredicted RBP18.12■□□□□ 0.49
RBM39-205ENST00000397370 ATP6V0A1Q93050 837 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 FAM167AQ96KS9 214 aa18.12■□□□□ 0.49
RBM39-205ENST00000397370 EVPLQ92817 2033 aa18.11■□□□□ 0.49
RBM39-205ENST00000397370 RRN3P2A6NIE6 340 aa18.11■□□□□ 0.49
RBM39-205ENST00000397370 H0YGN5 161 aa18.11■□□□□ 0.49
RBM39-205ENST00000397370 TREHO43280 583 aa18.11■□□□□ 0.49
RBM39-205ENST00000397370 OATP04181 439 aa18.11■□□□□ 0.49
RBM39-205ENST00000397370 QARSP47897 775 aaKnown RBP18.11■□□□□ 0.49
RBM39-205ENST00000397370 PRKCEQ02156 737 aa18.11■□□□□ 0.49
RBM39-205ENST00000397370 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
RBM39-205ENST00000397370 IL17AQ16552 155 aa18.11■□□□□ 0.49
RBM39-205ENST00000397370 TRMT1LQ7Z2T5 733 aaKnown RBP18.11■□□□□ 0.49
RBM39-205ENST00000397370 DYDC2Q96IM9 177 aa18.11■□□□□ 0.49
RBM39-205ENST00000397370 EIF2AK1Q9BQI3 630 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms