RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CXCL10P02778 98 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 DNAJB2P25686 324 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 THPOP40225 353 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 NPY5RQ15761 445 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 FAM160B1Q5W0V3 765 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 ZNF746Q6NUN9 644 aaPredicted RBP16.5■□□□□ 0.23
SEC13-208ENST00000397109 MIS18BP1Q6P0N0 1132 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 LMBR1Q8WVP7 490 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 WNT8BQ93098 351 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 LIMCH1Q9UPQ0 1083 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 RSPH10B2B2RC85 870 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 DDX39AO00148 427 aaKnown RBP16.49■□□□□ 0.23
SEC13-208ENST00000397109 RPLP2P05387 115 aaKnown RBP16.49■□□□□ 0.23
SEC13-208ENST00000397109 RSPH10BP0C881 870 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 MCM2P49736 904 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 KRT76Q01546 638 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 NONOQ15233 471 aaKnown RBP eCLIP16.49■□□□□ 0.23
SEC13-208ENST00000397109 RAB30Q15771 203 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 GRIK4Q16099 956 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 TAF2Q6P1X5 1199 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 CNKSR3Q6P9H4 555 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 MOXD1Q6UVY6 613 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 ABHD15Q6UXT9 468 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 PHOSPHO2Q8TCD6 241 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 SEMA6BQ9H3T3 888 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 MSRAQ9UJ68 235 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 KCNJ14Q9UNX9 436 aa16.49■□□□□ 0.23
SEC13-208ENST00000397109 CYP3A7-CYP3A51PA0A087WV96 503 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 IGKV6D-21A0A0A0MT36 114 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 BACH1O14867 736 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 EFCAB14O75071 495 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 LARGE1O95461 756 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 CCNE2O96020 404 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 CYP3A7P24462 503 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 GPNMBQ14956 572 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 TRAF7Q6Q0C0 670 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 RPAINQ86UA6 219 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 RSPH3Q86UC2 560 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 SMAP1Q8IYB5 467 aaPredicted RBP16.48■□□□□ 0.23
SEC13-208ENST00000397109 NSUN7Q8NE18 718 aaKnown RBP16.48■□□□□ 0.23
SEC13-208ENST00000397109 LENG9Q96B70 501 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 TIFAQ96CG3 184 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 MYO9BQ13459 2157 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 MBLAC1A4D2B0 266 aaPredicted RBP16.48■□□□□ 0.23
SEC13-208ENST00000397109 GRXCR1A8MXD5 290 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 EDIL3O43854 480 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 NBNO60934 754 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 CD2BP2O95400 341 aaKnown RBP16.48■□□□□ 0.23
SEC13-208ENST00000397109 INSRRP14616 1297 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 ATP2A2P16615 1042 aaKnown RBP16.48■□□□□ 0.23
SEC13-208ENST00000397109 PLCB4Q15147 1175 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 Q4G0T1 1027 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
SEC13-208ENST00000397109 SLC9A7Q96T83 725 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 RIT2Q99578 217 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 PBX4Q9BYU1 374 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 BRMS1Q9HCU9 246 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 TUBE1Q9UJT0 475 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 TRPC6Q9Y210 931 aa16.48■□□□□ 0.23
SEC13-208ENST00000397109 ABHD14A-ACY1A0A1B0GW23 586 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 POTEB3A0JP26 581 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 MSH4O15457 936 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 HBP1O60381 514 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 PSAPP07602 524 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 FDPSP14324 419 aaKnown RBP16.47■□□□□ 0.23
SEC13-208ENST00000397109 FAM26DQ5JW98 314 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 PDXDC2PQ6P474 469 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 POTEBQ6S5H4 581 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 NAP1L4Q99733 375 aaKnown RBP16.47■□□□□ 0.23
SEC13-208ENST00000397109 ZNF302Q9NR11 478 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 STXBP5LQ9Y2K9 1186 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 PCDHA10Q9Y5I2 948 aa16.47■□□□□ 0.23
SEC13-208ENST00000397109 MYH9P35579 1960 aaKnown RBP16.46■□□□□ 0.23
SEC13-208ENST00000397109 WDR64B1ANS9 1081 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 GAS7O60861 476 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 KCNJ6P48051 423 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 IGBP1P78318 339 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 TRIM29Q14134 588 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 IKBKEQ14164 716 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 MBTPS1Q14703 1052 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 INF2Q27J81 1249 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 SWSAP1Q6NVH7 229 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 CCDC60Q8IWA6 550 aaPredicted RBP16.46■□□□□ 0.23
SEC13-208ENST00000397109 ATP8B4Q8TF62 1192 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 SLC5A5Q92911 643 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 FAM161BQ96MY7 647 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 MBOAT7Q96N66 472 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 UIMC1Q96RL1 719 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 TEKT3Q9BXF9 490 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 TTYH1Q9H313 450 aaPredicted RBP16.46■□□□□ 0.23
SEC13-208ENST00000397109 SH2B1Q9NRF2 756 aaPredicted RBP16.46■□□□□ 0.23
SEC13-208ENST00000397109 PCDHA11Q9Y5I1 949 aa16.46■□□□□ 0.23
SEC13-208ENST00000397109 GCFC2P16383 781 aaKnown RBP16.45■□□□□ 0.22
SEC13-208ENST00000397109 SFNP31947 248 aa16.45■□□□□ 0.22
SEC13-208ENST00000397109 KRT2P35908 639 aa16.45■□□□□ 0.22
SEC13-208ENST00000397109 PBX2P40425 430 aa16.45■□□□□ 0.22
SEC13-208ENST00000397109 MARCH8Q5T0T0 291 aa16.45■□□□□ 0.22
SEC13-208ENST00000397109 LRCH2Q5VUJ6 765 aa16.45■□□□□ 0.22
SEC13-208ENST00000397109 NEK8Q86SG6 692 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms