RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CWC27Q6UX04 472 aaKnown RBP17.28■□□□□ 0.36
SEC13-206ENST00000397102 NPAS4Q8IUM7 802 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 CRIPAKQ8N1N5 446 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 KLHL23Q8NBE8 558 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 POF1BQ8WVV4 589 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 LINC01599Q8WXQ3 324 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 PHF7Q9BWX1 381 aaPredicted RBP17.28■□□□□ 0.36
SEC13-206ENST00000397102 TUBE1Q9UJT0 475 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 USP15Q9Y4E8 981 aaPredicted RBP17.28■□□□□ 0.36
SEC13-206ENST00000397102 CDY2AQ9Y6F7 541 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 LOXHD1Q8IVV2 1947 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 PNMA6FA0A0J9YX94 578 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 MBLAC1A4D2B0 266 aaPredicted RBP17.27■□□□□ 0.36
SEC13-206ENST00000397102 GFRA3O60609 400 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 GLP2RO95838 553 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 RPLP2P05387 115 aaKnown RBP17.27■□□□□ 0.36
SEC13-206ENST00000397102 TCF7P36402 384 aaPredicted RBP17.27■□□□□ 0.36
SEC13-206ENST00000397102 GRM4Q14833 912 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 GRIK4Q16099 956 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 GIMAP8Q8ND71 665 aaPredicted RBP17.27■□□□□ 0.36
SEC13-206ENST00000397102 DNAJB3Q8WWF6 145 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 FTHL17Q9BXU8 183 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 IRF2BPLQ9H1B7 796 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 BARX2Q9UMQ3 279 aaPredicted RBP17.27■□□□□ 0.36
SEC13-206ENST00000397102 SQORQ9Y6N5 450 aa17.27■□□□□ 0.36
SEC13-206ENST00000397102 CYTH3O43739 400 aa17.26■□□□□ 0.35
SEC13-206ENST00000397102 STAG3L1P0CL83 205 aa17.26■□□□□ 0.35
SEC13-206ENST00000397102 MRPS6P82932 125 aaKnown RBP17.26■□□□□ 0.35
SEC13-206ENST00000397102 HDAC1Q13547 482 aaPredicted RBP17.26■□□□□ 0.35
SEC13-206ENST00000397102 PCNX4Q63HM2 1172 aa17.26■□□□□ 0.35
SEC13-206ENST00000397102 XRRA1Q6P2D8 792 aa17.26■□□□□ 0.35
SEC13-206ENST00000397102 NLRX1Q86UT6 975 aa17.26■□□□□ 0.35
SEC13-206ENST00000397102 AGO3Q9H9G7 860 aaKnown RBP17.26■□□□□ 0.35
SEC13-206ENST00000397102 ERAP1Q9NZ08 941 aa17.26■□□□□ 0.35
SEC13-206ENST00000397102 USP34Q70CQ2 3546 aa17.25■□□□□ 0.35
SEC13-206ENST00000397102 ATF7P17544 494 aaPredicted RBP17.25■□□□□ 0.35
SEC13-206ENST00000397102 CD52P31358 61 aa17.25■□□□□ 0.35
SEC13-206ENST00000397102 VCPP55072 806 aaKnown RBP17.25■□□□□ 0.35
SEC13-206ENST00000397102 PAN2Q504Q3 1202 aaKnown RBP17.25■□□□□ 0.35
SEC13-206ENST00000397102 MARCH8Q5T0T0 291 aa17.25■□□□□ 0.35
SEC13-206ENST00000397102 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
SEC13-206ENST00000397102 RBM23Q86U06 439 aaKnown RBP17.25■□□□□ 0.35
SEC13-206ENST00000397102 RTN4RL1Q86UN2 441 aaPredicted RBP17.25■□□□□ 0.35
SEC13-206ENST00000397102 ASIC4Q96FT7 647 aa17.25■□□□□ 0.35
SEC13-206ENST00000397102 RPGRIP1Q96KN7 1286 aa17.25■□□□□ 0.35
SEC13-206ENST00000397102 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
SEC13-206ENST00000397102 FAM86C1Q9NVL1 165 aa17.25■□□□□ 0.35
SEC13-206ENST00000397102 PLXNA3P51805 1871 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 FSD2A1L4K1 749 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 HIP1O00291 1037 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 MARK3P27448 753 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 AVPR2P30518 371 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 IER5Q5VY09 327 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 SMARCC2Q8TAQ2 1214 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 SEPT1Q8WYJ6 367 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 SUSD6Q92537 303 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 GPRASP2Q96D09 838 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 TLE6Q9H808 572 aa17.24■□□□□ 0.35
SEC13-206ENST00000397102 FNDC1Q4ZHG4 1894 aaPredicted RBP17.23■□□□□ 0.35
SEC13-206ENST00000397102 GSTTP1A0A1W2PQM5 241 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 SCG2P13521 617 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 KCNA2P16389 499 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 UBE3AQ05086 875 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 ATP8B4Q8TF62 1192 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 ATOH1Q92858 354 aaPredicted RBP17.23■□□□□ 0.35
SEC13-206ENST00000397102 CUL5Q93034 780 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 CDHR1Q96JP9 859 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 SMARCAD1Q9H4L7 1026 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 TRPV2Q9Y5S1 764 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 CACNA1HO95180 2353 aa17.23■□□□□ 0.35
SEC13-206ENST00000397102 RRN3P2A6NIE6 340 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 M0QZ92 97 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 ATP9AO75110 1047 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 NUBP1P53384 320 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 FOXK2Q01167 660 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 PTPN21Q16825 1174 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 GLG1Q92896 1179 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 CDCA3Q99618 268 aaPredicted RBP17.22■□□□□ 0.35
SEC13-206ENST00000397102 FAM49AQ9H0Q0 323 aaPredicted RBP17.22■□□□□ 0.35
SEC13-206ENST00000397102 OSBPL3Q9H4L5 887 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 LRFN2Q9ULH4 789 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 PADI3Q9ULW8 664 aa17.22■□□□□ 0.35
SEC13-206ENST00000397102 IGSF9BQ9UPX0 1349 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 IGBP1P78318 339 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 TROAPQ12815 778 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 TRDNQ13061 729 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 PAK2Q13177 524 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 DUSP6Q16828 381 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 USP17L6PQ6QN14 398 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 MICAL1Q8TDZ2 1067 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 TLR9Q9NR96 1032 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 PCDHB12Q9Y5F1 795 aa17.21■□□□□ 0.35
SEC13-206ENST00000397102 ERICH2A1L162 156 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 MEIS2O14770 477 aa17.2■□□□□ 0.34
SEC13-206ENST00000397102 IFIT3O14879 490 aaKnown RBP17.2■□□□□ 0.34
SEC13-206ENST00000397102 PER2O15055 1255 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms