RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TUFT1Q9NNX1 390 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 PPME1Q9Y570 386 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 CABYRO75952 493 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 PGK1P00558 417 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 ASGR1P07306 291 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 TCF7P36402 384 aaPredicted RBP11.96□□□□□ -0.49
NUP98-205ENST00000397007 GRB10Q13322 594 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 GPNMBQ14956 572 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 LRCH2Q5VUJ6 765 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 RESP18Q5W5W9 173 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 FERMT3Q86UX7 667 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 LEO1Q8WVC0 666 aaPredicted RBP11.96□□□□□ -0.49
NUP98-205ENST00000397007 SEPT1Q8WYJ6 367 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 TOX2Q96NM4 488 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 TEKT3Q9BXF9 490 aa11.96□□□□□ -0.49
NUP98-205ENST00000397007 H3BQV1 296 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 XRCC6P12956 609 aaKnown RBP eCLIP11.96□□□□□ -0.5
NUP98-205ENST00000397007 MCM7P33993 719 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 LONP1P36776 959 aaKnown RBP11.96□□□□□ -0.5
NUP98-205ENST00000397007 DNM1Q05193 864 aaKnown RBP11.96□□□□□ -0.5
NUP98-205ENST00000397007 IFFO2Q5TF58 517 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 ANO5Q75V66 913 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 TTC12Q9H892 705 aaPredicted RBP11.96□□□□□ -0.5
NUP98-205ENST00000397007 DBR1Q9UK59 544 aaKnown RBP11.96□□□□□ -0.5
NUP98-205ENST00000397007 NOL7Q9UMY1 257 aaKnown RBP11.96□□□□□ -0.5
NUP98-205ENST00000397007 MGAT3Q09327 533 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 FAM26DQ5JW98 314 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 CATSPER3Q86XQ3 398 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 DHX38Q92620 1227 aaKnown RBP11.96□□□□□ -0.5
NUP98-205ENST00000397007 RNPEPQ9H4A4 650 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 BLOC1S4Q9NUP1 217 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 PCDHA10Q9Y5I2 948 aa11.96□□□□□ -0.5
NUP98-205ENST00000397007 WDR64B1ANS9 1081 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 BEX3Q00994 111 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 DGKDQ16760 1214 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 ENGASEQ8NFI3 743 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 SPATA33Q96N06 139 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 RNF208Q9H0X6 261 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 GTF2IRD1Q9UHL9 959 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
NUP98-205ENST00000397007 VPS37CA5D8V6 355 aaPredicted RBP11.95□□□□□ -0.5
NUP98-205ENST00000397007 TNPO1Q92973 898 aaKnown RBP11.95□□□□□ -0.5
NUP98-205ENST00000397007 A0A1W2PQ27 194 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 A0A1W2PQ64 194 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 A0A1W2PQD8 194 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 EN2P19622 333 aaPredicted RBP11.95□□□□□ -0.5
NUP98-205ENST00000397007 SLC39A5Q6ZMH5 540 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 DHX37Q8IY37 1157 aaKnown RBP11.95□□□□□ -0.5
NUP98-205ENST00000397007 PCSK9Q8NBP7 692 aaKnown RBP11.95□□□□□ -0.5
NUP98-205ENST00000397007 MTRQ99707 1265 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 EIF2AK1Q9BQI3 630 aaKnown RBP11.95□□□□□ -0.5
NUP98-205ENST00000397007 DISC1Q9NRI5 854 aa11.95□□□□□ -0.5
NUP98-205ENST00000397007 POTEMA6NI47 508 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 ECM2O94769 699 aaPredicted RBP11.94□□□□□ -0.5
NUP98-205ENST00000397007 USP49Q70CQ1 688 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 KCNK18Q7Z418 384 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 SDF4Q9BRK5 362 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 MTG1Q9BT17 334 aaPredicted RBP11.94□□□□□ -0.5
NUP98-205ENST00000397007 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 PCDHA7Q9UN72 937 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 FRMD3A2A2Y4 597 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 C22orf31O95567 290 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 ANP32AP39687 249 aaKnown RBP11.94□□□□□ -0.5
NUP98-205ENST00000397007 SLC12A3P55017 1021 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 EHHADHQ08426 723 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 SNW1Q13573 536 aaKnown RBP11.94□□□□□ -0.5
NUP98-205ENST00000397007 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 ELOA2Q8IYF1 753 aaPredicted RBP11.94□□□□□ -0.5
NUP98-205ENST00000397007 WNT8BQ93098 351 aa11.94□□□□□ -0.5
NUP98-205ENST00000397007 DHX33Q9H6R0 707 aaKnown RBP11.94□□□□□ -0.5
NUP98-205ENST00000397007 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
NUP98-205ENST00000397007 ARRDC4Q8NCT1 418 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 ATP8B4Q8TF62 1192 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 TBX21Q9UL17 535 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 PCDHA12Q9UN75 941 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 CSRNP2Q9H175 543 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 GAS7O60861 476 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
NUP98-205ENST00000397007 PSEN2P49810 448 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 LRRC26Q2I0M4 334 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 RNF180Q86T96 592 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 SERINC5Q86VE9 423 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 KDM3AQ9Y4C1 1321 aa11.93□□□□□ -0.5
NUP98-205ENST00000397007 PP2D1A8MPX8 630 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 ARVCFO00192 962 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 ZNF286BP0CG31 522 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 MDM2Q00987 491 aaPredicted RBP11.92□□□□□ -0.5
NUP98-205ENST00000397007 MFSD10Q14728 455 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 ADALQ6DHV7 355 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 TRIM50Q86XT4 487 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
NUP98-205ENST00000397007 FIZ1Q96SL8 496 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 STRA6Q9BX79 667 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 SMARCAD1Q9H4L7 1026 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 CUTAO60888 179 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 PSAPP07602 524 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 MCCD1P59942 119 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms