RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KRT79Q5XKE5 535 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 SIX2Q9NPC8 291 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 MTMR4Q9NYA4 1195 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 RNF14Q9UBS8 474 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 DDX25Q9UHL0 483 aaKnown RBP15.28■□□□□ 0.04
NUP98-204ENST00000397004 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.28■□□□□ 0.04
NUP98-204ENST00000397004 SART1O43290 800 aaKnown RBP15.28■□□□□ 0.04
NUP98-204ENST00000397004 FOXR2Q6PJQ5 311 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 ADGRF4Q8IZF3 695 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 SETDB2Q96T68 719 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 OSBPL7Q9BZF2 842 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 PLCB1Q9NQ66 1216 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 NAGPAQ9UK23 515 aa15.28■□□□□ 0.04
NUP98-204ENST00000397004 DNM1LO00429 736 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 USP11P51784 963 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 PPP4R3AQ6IN85 833 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 CD248Q9HCU0 757 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 PPANQ9NQ55 473 aaKnown RBP15.27■□□□□ 0.04
NUP98-204ENST00000397004 AMACRQ9UHK6 382 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 TSKSQ9UJT2 592 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 ATXN2Q99700 1313 aaKnown RBP15.27■□□□□ 0.04
NUP98-204ENST00000397004 SMARCA1P28370 1054 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 HYIQ5T013 277 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 TEX11Q8IYF3 940 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 NARFQ9UHQ1 456 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 STXBP5LQ9Y2K9 1186 aa15.27■□□□□ 0.04
NUP98-204ENST00000397004 LOC102724159A0A0B4J2E5 919 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L15C9J2P7 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L13C9JLJ4 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L11C9JVI0 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L18D6R9N7 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L22D6RA61 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L17D6RBQ6 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L19D6RCP7 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L20D6RJB6 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 UCHL3P15374 230 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L24Q0WX57 530 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 IFT88Q13099 833 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 ADAM9Q13443 819 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 PWP2Q15269 919 aaKnown RBP15.27■□□□□ 0.03
NUP98-204ENST00000397004 USP17L6PQ6QN14 398 aa15.27■□□□□ 0.03
NUP98-204ENST00000397004 BAG3O95817 575 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 PON1P27169 355 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 CASP4P49662 377 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 SLC12A3P55017 1021 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 POU5F1Q01860 360 aaKnown RBP15.26■□□□□ 0.03
NUP98-204ENST00000397004 DCAF12L1Q5VU92 463 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 WHAMMQ8TF30 809 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
NUP98-204ENST00000397004 DDX20Q9UHI6 824 aaKnown RBP15.26■□□□□ 0.03
NUP98-204ENST00000397004 IGKV6D-41A0A0C4DH26 115 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 FRMD3A2A2Y4 597 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 POTEFA5A3E0 1075 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 DAPK3O43293 454 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 FAM107AO95990 144 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 PLA2G4BP0C869 781 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 COPB2P35606 906 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 GPSM2P81274 684 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 ORC2Q13416 577 aaPredicted RBP15.26■□□□□ 0.03
NUP98-204ENST00000397004 POTEGQ6S5H5 508 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 POTEEQ6S8J3 1075 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 MAATS1Q7Z4T9 603 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 C1orf131Q8NDD1 294 aaKnown RBP15.26■□□□□ 0.03
NUP98-204ENST00000397004 CYFIP2Q96F07 1278 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 CEP89Q96ST8 783 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 YY1AP1Q9H869 796 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 EMILIN3Q9NT22 766 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 AKAP3O75969 853 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 FGFR1OPO95684 399 aaKnown RBP15.26■□□□□ 0.03
NUP98-204ENST00000397004 TAL1P17542 331 aaPredicted RBP15.26■□□□□ 0.03
NUP98-204ENST00000397004 GABPAQ06546 454 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 SPIRE1Q08AE8 756 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
NUP98-204ENST00000397004 FAM228AQ86W67 206 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 TPCN2Q8NHX9 752 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 EPB41L4BQ9H329 900 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 USP21Q9UK80 565 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 FBXL5Q9UKA1 691 aa15.26■□□□□ 0.03
NUP98-204ENST00000397004 USP17L10C9JJH3 530 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 E7EVH7 732 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 CEP104O60308 925 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 GSCP56915 257 aaPredicted RBP15.25■□□□□ 0.03
NUP98-204ENST00000397004 ARHGAP27Q6ZUM4 889 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 CEP63Q96MT8 703 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 TSG101Q99816 390 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 PCDHA12Q9UN75 941 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
NUP98-204ENST00000397004 NOC2LQ9Y3T9 749 aaKnown RBP15.25■□□□□ 0.03
NUP98-204ENST00000397004 IGSF9BQ9UPX0 1349 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 RASSF9O75901 435 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 TMEM266Q2M3C6 531 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 CCDC13Q8IYE1 715 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 OTUD6BQ8N6M0 293 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 CENPHQ9H3R5 247 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 CD209Q9NNX6 404 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 OSGEPQ9NPF4 335 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 RSPH10B2B2RC85 870 aa15.25■□□□□ 0.03
NUP98-204ENST00000397004 MEIS1O00470 390 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms