RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 GCFC2P16383 781 aaKnown RBP20.17■□□□□ 0.82
IFFO1-204ENST00000396840 IKQ13123 557 aaPredicted RBP20.17■□□□□ 0.82
IFFO1-204ENST00000396840 MEI1Q5TIA1 1274 aa20.17■□□□□ 0.82
IFFO1-204ENST00000396840 NUCKS1Q9H1E3 243 aaKnown RBP20.17■□□□□ 0.82
IFFO1-204ENST00000396840 GANQ9H2C0 597 aa20.17■□□□□ 0.82
IFFO1-204ENST00000396840 DHX36Q9H2U1 1008 aaKnown RBP20.17■□□□□ 0.82
IFFO1-204ENST00000396840 ATF5Q9Y2D1 282 aaPredicted RBP20.17■□□□□ 0.82
IFFO1-204ENST00000396840 SHOX2O60902 331 aaPredicted RBP20.17■□□□□ 0.82
IFFO1-204ENST00000396840 KCNA1Q09470 495 aa20.17■□□□□ 0.82
IFFO1-204ENST00000396840 SEPT2Q15019 361 aa20.17■□□□□ 0.82
IFFO1-204ENST00000396840 CDC37Q16543 378 aaPredicted RBP20.17■□□□□ 0.82
IFFO1-204ENST00000396840 GJB7Q6PEY0 223 aa20.17■□□□□ 0.82
IFFO1-204ENST00000396840 ZNF571Q7Z3V5 609 aaPredicted RBP20.17■□□□□ 0.82
IFFO1-204ENST00000396840 CASKIN2Q8WXE0 1202 aa20.17■□□□□ 0.82
IFFO1-204ENST00000396840 SH3GL2Q99962 352 aa20.17■□□□□ 0.82
IFFO1-204ENST00000396840 ARFGEF1Q9Y6D6 1849 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 CLIC2O15247 247 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 EEF2P13639 858 aaKnown RBP20.16■□□□□ 0.82
IFFO1-204ENST00000396840 SLC12A3P55017 1021 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 NNTQ13423 1086 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 CFAP58Q5T655 872 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 CERKQ8TCT0 537 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 REEP2Q9BRK0 252 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 AP1M1Q9BXS5 423 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 TSKSQ9UJT2 592 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 RAD51CO43502 376 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 GNA14O95837 355 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 SYN2Q92777 582 aaPredicted RBP20.16■□□□□ 0.82
IFFO1-204ENST00000396840 ZC3H12CQ9C0D7 883 aaKnown RBP20.16■□□□□ 0.82
IFFO1-204ENST00000396840 CENPHQ9H3R5 247 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 KCNQ5Q9NR82 932 aa20.16■□□□□ 0.82
IFFO1-204ENST00000396840 ARMCX3Q9UH62 379 aaPredicted RBP20.16■□□□□ 0.82
IFFO1-204ENST00000396840 GRIN2DO15399 1336 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 HLA-DOAP06340 250 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 CASP4P49662 377 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 HLTFQ14527 1009 aaKnown RBP eCLIP20.15■□□□□ 0.82
IFFO1-204ENST00000396840 CAVIN3Q969G5 261 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 KCNMB3Q9NPA1 279 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 USP21Q9UK80 565 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 G3V3G9 751 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 UCHL3P15374 230 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 HOXA13P31271 388 aaPredicted RBP20.15■□□□□ 0.82
IFFO1-204ENST00000396840 CORO7P57737 925 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 ARHGAP4P98171 946 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 DDR1Q08345 913 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 HYIQ5T013 277 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 DCAF8Q5TAQ9 597 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 CYP2W1Q8TAV3 490 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 TAF4BQ92750 862 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 INPP4AQ96PE3 977 aaPredicted RBP20.15■□□□□ 0.82
IFFO1-204ENST00000396840 DNAJC18Q9H819 358 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 GDF3Q9NR23 364 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 AIPL1Q9NZN9 384 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 AJAP1Q9UKB5 411 aaPredicted RBP20.15■□□□□ 0.82
IFFO1-204ENST00000396840 PCDHGC5Q9Y5F6 944 aa20.15■□□□□ 0.82
IFFO1-204ENST00000396840 ZNF233A6NK53 670 aa20.14■□□□□ 0.82
IFFO1-204ENST00000396840 TMCO5BA8MYB1 307 aa20.14■□□□□ 0.82
IFFO1-204ENST00000396840 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.82
IFFO1-204ENST00000396840 CEP104O60308 925 aa20.14■□□□□ 0.82
IFFO1-204ENST00000396840 HOXD13P35453 343 aa20.14■□□□□ 0.82
IFFO1-204ENST00000396840 GIT2Q14161 759 aa20.14■□□□□ 0.82
IFFO1-204ENST00000396840 ALS2CLQ60I27 953 aa20.14■□□□□ 0.82
IFFO1-204ENST00000396840 DDX42Q86XP3 938 aaKnown RBP eCLIP20.14■□□□□ 0.82
IFFO1-204ENST00000396840 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.82
IFFO1-204ENST00000396840 SWAP70Q9UH65 585 aa20.14■□□□□ 0.82
IFFO1-204ENST00000396840 MYH4Q9Y623 1939 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 ADAMTSL1Q8N6G6 1762 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 MEIS2O14770 477 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 EIF3HO15372 352 aaKnown RBP eCLIP20.14■□□□□ 0.81
IFFO1-204ENST00000396840 AKAP3O75969 853 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 MAGEA9P43362 315 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 SLC20A2Q08357 652 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 PAK2Q13177 524 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 RPS6KA1Q15418 735 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 SLFN13Q68D06 897 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 PACS2Q86VP3 889 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 PCDHB13Q9Y5F0 798 aa20.14■□□□□ 0.81
IFFO1-204ENST00000396840 XRCC5P13010 732 aaKnown RBP20.13■□□□□ 0.81
IFFO1-204ENST00000396840 RBM5P52756 815 aaKnown RBP eCLIP20.13■□□□□ 0.81
IFFO1-204ENST00000396840 EXOC3L4Q17RC7 722 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 GLE1Q53GS7 698 aaKnown RBP20.13■□□□□ 0.81
IFFO1-204ENST00000396840 IRF2BP2Q7Z5L9 587 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 BHMT2Q9H2M3 363 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 FAM86B1E9PN63 330 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 GDF11O95390 407 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 GCNT3O95395 438 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 FAM86B2P0C5J1 330 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 KNOP1Q1ED39 458 aaKnown RBP20.13■□□□□ 0.81
IFFO1-204ENST00000396840 MAATS1Q7Z4T9 603 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 KIAA0825Q8IV33 1275 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 USP38Q8NB14 1042 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 DNM3Q9UQ16 869 aa20.13■□□□□ 0.81
IFFO1-204ENST00000396840 PON1P27169 355 aa20.12■□□□□ 0.81
IFFO1-204ENST00000396840 MARSP56192 900 aaKnown RBP20.12■□□□□ 0.81
IFFO1-204ENST00000396840 GUCY1A3Q02108 690 aa20.12■□□□□ 0.81
IFFO1-204ENST00000396840 RGL1Q9NZL6 768 aa20.12■□□□□ 0.81
IFFO1-204ENST00000396840 SRCAPQ6ZRS2 3230 aa20.12■□□□□ 0.81
IFFO1-204ENST00000396840 EBAG9O00559 213 aa20.12■□□□□ 0.81
IFFO1-204ENST00000396840 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms