RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 UHRF1BP1Q6BDS2 1440 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 ZBED1O96006 694 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 BEND6Q5SZJ8 279 aaPredicted RBP15.02□□□□□ -0.01
COL4A3-202ENST00000396578 CARD14Q9BXL6 1004 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 STX18Q9P2W9 335 aaKnown RBP15.02□□□□□ -0.01
COL4A3-202ENST00000396578 CDV3Q9UKY7 258 aaKnown RBP15.02□□□□□ -0.01
COL4A3-202ENST00000396578 ARHGAP10A1A4S6 786 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 KRT37O76014 449 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 EIF4A3P38919 411 aaKnown RBP15.02□□□□□ -0.01
COL4A3-202ENST00000396578 MORF4L2Q15014 288 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 ASPRV1Q53RT3 343 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 RGS9BPQ6ZS82 235 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 ABCB6Q9NP58 842 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 IGBP1P78318 339 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 NR1H3Q13133 447 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 COPEO14579 308 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 GOLGA8HP0CJ92 632 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 HLA-DPA1P20036 260 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 MYO1EQ12965 1108 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 PABPC4Q13310 644 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL4A3-202ENST00000396578 C11orf57Q6ZUT1 292 aaPredicted RBP15.01□□□□□ -0.01
COL4A3-202ENST00000396578 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 H0Y3Z8 333 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 ZBED6P86452 979 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 LZICQ8WZA0 190 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 NAF1Q96HR8 494 aaKnown RBP15.01□□□□□ -0.01
COL4A3-202ENST00000396578 APOL6Q9BWW8 343 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 ZC3H12BQ5HYM0 836 aaKnown RBP15.01□□□□□ -0.01
COL4A3-202ENST00000396578 EDC3Q96F86 508 aaKnown RBP15.01□□□□□ -0.01
COL4A3-202ENST00000396578 HABP4Q5JVS0 413 aaKnown RBP15.01□□□□□ -0.01
COL4A3-202ENST00000396578 ICE2Q659A1 982 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 SNX19Q92543 992 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 RNF26Q9BY78 433 aaPredicted RBP15.01□□□□□ -0.01
COL4A3-202ENST00000396578 BTG4Q9NY30 223 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 A1BGP04217 495 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 ICA1Q05084 483 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 ARL13BQ3SXY8 428 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 MIS18BP1Q6P0N0 1132 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 TTC17Q96AE7 1141 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 CCDC87Q9NVE4 849 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
COL4A3-202ENST00000396578 RASA4BC9J798 803 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 RASA4O43374 803 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 VSTM4Q8IW00 320 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 TTLL11Q8NHH1 800 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 NR1H4Q96RI1 486 aaPredicted RBP15□□□□□ -0.01
COL4A3-202ENST00000396578 KLC2Q9H0B6 622 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 GINM1Q9NU53 330 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 TMEM232C9JQI7 657 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 SLC7A3Q8WY07 619 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 MTBPQ96DY7 904 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 CALR3Q96L12 384 aaKnown RBP15□□□□□ -0.01
COL4A3-202ENST00000396578 KIAA0232Q92628 1395 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 IL13P35225 146 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 HNRNPH2P55795 449 aaKnown RBP15□□□□□ -0.01
COL4A3-202ENST00000396578 GTF2IP78347 998 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 FOXD4Q12950 439 aaPredicted RBP15□□□□□ -0.01
COL4A3-202ENST00000396578 PSMD2Q13200 908 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 DRP2Q13474 957 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 KRT33BQ14525 404 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 SPTLC3Q9NUV7 552 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 RWDD2BP57060 319 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 LLGL1Q15334 1064 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 DCAF15Q66K64 600 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 ABI1Q8IZP0 508 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 YIPF3Q9GZM5 350 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 LRRC4Q9HBW1 653 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 TBCCQ15814 346 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 TTLL7Q6ZT98 887 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 OR9Q1Q8NGQ5 310 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 VPS39Q96JC1 886 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 CHCHD3Q9NX63 227 aaKnown RBP15□□□□□ -0.01
COL4A3-202ENST00000396578 SFMBT1Q9UHJ3 866 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 EFCAB14O75071 495 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 GADL1Q6ZQY3 521 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 ANO5Q75V66 913 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 KDM1AO60341 852 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 SERPINB10P48595 397 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 TFAMQ00059 246 aaKnown RBP15□□□□□ -0.01
COL4A3-202ENST00000396578 FBXO38Q6PIJ6 1188 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 FAF2Q96CS3 445 aa15□□□□□ -0.01
COL4A3-202ENST00000396578 GCFC2P16383 781 aaKnown RBP14.99□□□□□ -0.01
COL4A3-202ENST00000396578 BBS9Q3SYG4 887 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 GPATCH4Q5T3I0 446 aaKnown RBP14.99□□□□□ -0.01
COL4A3-202ENST00000396578 NACC1Q96RE7 527 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 CCDC188H7C350 402 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 RAPGEF5Q92565 580 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 WDR64B1ANS9 1081 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 KRT8P05787 483 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 ARHGAP18Q8N392 663 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 HSPH1Q92598 858 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 LMCD1Q9NZU5 365 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 SATB2Q9UPW6 733 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 FNDC3AQ9Y2H6 1198 aaKnown RBP14.99□□□□□ -0.01
COL4A3-202ENST00000396578 CLIC2O15247 247 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 SLC24A3Q9HC58 644 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 ARHGAP26Q9UNA1 814 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 HNRNPCP07910 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL4A3-202ENST00000396578 MAP3K10Q02779 954 aa14.99□□□□□ -0.01
COL4A3-202ENST00000396578 CCDC90BQ9GZT6 254 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms