RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 AKR1B10O60218 316 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 POLD1P28340 1107 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 ZYXQ15942 572 aaKnown RBP18.27■□□□□ 0.52
TRIM39-205ENST00000396551 STK24Q9Y6E0 443 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 PRPF6O94906 941 aaKnown RBP18.27■□□□□ 0.51
TRIM39-205ENST00000396551 NR2F2P24468 414 aa18.27■□□□□ 0.51
TRIM39-205ENST00000396551 UBXN2AP68543 259 aa18.27■□□□□ 0.51
TRIM39-205ENST00000396551 PLCD3Q8N3E9 789 aa18.27■□□□□ 0.51
TRIM39-205ENST00000396551 CAPZA3Q96KX2 299 aa18.27■□□□□ 0.51
TRIM39-205ENST00000396551 GLIS2Q9BZE0 524 aaPredicted RBP18.27■□□□□ 0.51
TRIM39-205ENST00000396551 VEZTQ9HBM0 779 aa18.27■□□□□ 0.51
TRIM39-205ENST00000396551 HDAC9Q9UKV0 1011 aa18.27■□□□□ 0.51
TRIM39-205ENST00000396551 ZNF185O15231 689 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 EYA4O95677 639 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 GFPT1Q06210 699 aaPredicted RBP18.26■□□□□ 0.51
TRIM39-205ENST00000396551 KNOP1Q1ED39 458 aaKnown RBP18.26■□□□□ 0.51
TRIM39-205ENST00000396551 ARHGAP27Q6ZUM4 889 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 MIGA2Q7L4E1 593 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 OTOP1Q7RTM1 612 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 VCPKMTQ9H867 229 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 ABCB6Q9NP58 842 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 MAP2K7O14733 419 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 CETN3O15182 167 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 USO1O60763 962 aaKnown RBP18.26■□□□□ 0.51
TRIM39-205ENST00000396551 PSMD10O75832 226 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 MOCS3O95396 460 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 KCNA3P22001 575 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 POLR2FP61218 127 aaKnown RBP18.26■□□□□ 0.51
TRIM39-205ENST00000396551 CTTNQ14247 550 aaKnown RBP18.26■□□□□ 0.51
TRIM39-205ENST00000396551 RTKN2Q8IZC4 609 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 HSD17B14Q9BPX1 270 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 SALL4Q9UJQ4 1053 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 FAM184BQ9ULE4 1060 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
TRIM39-205ENST00000396551 SSU72P8A0A1W2PR75 194 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 GCOM1H8Y6P7 765 aaPredicted RBP18.25■□□□□ 0.51
TRIM39-205ENST00000396551 PDE2AO00408 941 aaPredicted RBP18.25■□□□□ 0.51
TRIM39-205ENST00000396551 POLR2MP0CAP2 368 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
TRIM39-205ENST00000396551 GANQ9H2C0 597 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 FBXO28Q9NVF7 368 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 PJA2O43164 708 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 KCNH2Q12809 1159 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 PIGOQ8TEQ8 1089 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 SLITRK3O94933 977 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 MAGEA1P43355 309 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 RINT1Q6NUQ1 792 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 DPY19L2P1Q6NXN4 242 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 SYN2Q92777 582 aaPredicted RBP18.25■□□□□ 0.51
TRIM39-205ENST00000396551 SLC5A5Q92911 643 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 DYDC2Q96IM9 177 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 PGAP2Q9UHJ9 254 aa18.25■□□□□ 0.51
TRIM39-205ENST00000396551 ASTN1O14525 1302 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 ZBTB39O15060 712 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 BMT2Q1RMZ1 405 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 SFMBT2Q5VUG0 894 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 TRIM58Q8NG06 486 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 CHURC1Q8WUH1 139 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 RBAK-RBAKDNI3L0D1 243 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 CHMP2AO43633 222 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 TBC1D12O60347 775 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 USP14P54578 494 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 TDRD12Q587J7 1177 aaKnown RBP18.24■□□□□ 0.51
TRIM39-205ENST00000396551 LRCH2Q5VUJ6 765 aa18.24■□□□□ 0.51
TRIM39-205ENST00000396551 PDXKO00764 312 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 TACC1O75410 805 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 CAP2P40123 477 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 KCNA1Q09470 495 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 TRAF1Q13077 416 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 PPP2R5CQ13362 524 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
TRIM39-205ENST00000396551 L1RE1Q9UN81 338 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 SFI1A8K8P3 1242 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 SERPING1P05155 500 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 DPEP1P16444 411 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 SMC1AQ14683 1233 aaKnown RBP18.23■□□□□ 0.51
TRIM39-205ENST00000396551 NUCKS1Q9H1E3 243 aaKnown RBP18.23■□□□□ 0.51
TRIM39-205ENST00000396551 TUFT1Q9NNX1 390 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 JADE2Q9NQC1 790 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
TRIM39-205ENST00000396551 JRKLQ9Y4A0 524 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 PLA2G6O60733 806 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 SLC9C1Q4G0N8 1177 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 FKBP1CQ5VVH2 108 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 WDR93Q6P2C0 686 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 FRMD5Q7Z6J6 570 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 TEX2Q8IWB9 1127 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 ANKRD13CQ8N6S4 541 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 SNX12Q9UMY4 172 aa18.23■□□□□ 0.51
TRIM39-205ENST00000396551 AKAP3O75969 853 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 RASSF7Q02833 373 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 TPH2Q8IWU9 490 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 DRC1Q96MC2 740 aa18.22■□□□□ 0.51
TRIM39-205ENST00000396551 WRAP73Q9P2S5 460 aaPredicted RBP18.22■□□□□ 0.51
TRIM39-205ENST00000396551 MRPL11Q9Y3B7 192 aaKnown RBP18.22■□□□□ 0.51
TRIM39-205ENST00000396551 TBCAO75347 108 aaKnown RBP18.22■□□□□ 0.51
TRIM39-205ENST00000396551 GCNT3O95395 438 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms