RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MARK3P27448 753 aa21.62■■□□□ 1.05
HOXA9-202ENST00000396345 SESTD1Q86VW0 696 aa21.62■■□□□ 1.05
HOXA9-202ENST00000396345 AFAP1L1Q8TED9 768 aa21.62■■□□□ 1.05
HOXA9-202ENST00000396345 RNPEPQ9H4A4 650 aa21.62■■□□□ 1.05
HOXA9-202ENST00000396345 HDAC6Q9UBN7 1215 aa21.62■■□□□ 1.05
HOXA9-202ENST00000396345 GABBR1Q9UBS5 961 aa21.62■■□□□ 1.05
HOXA9-202ENST00000396345 EML1O00423 815 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 LAD1O00515 517 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 TLR3O15455 904 aaKnown RBP21.61■■□□□ 1.05
HOXA9-202ENST00000396345 SLC26A2P50443 739 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 SPIRE1Q08AE8 756 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 PKP1Q13835 747 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 NCAPH2Q6IBW4 605 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 PDXDC2PQ6P474 469 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 FAM173BQ6P4H8 233 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 FAM126BQ8IXS8 530 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 C7orf61Q8IZ16 206 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 MYH9P35579 1960 aaKnown RBP21.61■■□□□ 1.05
HOXA9-202ENST00000396345 PDE4DIPQ5VU43 2346 aa21.61■■□□□ 1.05
HOXA9-202ENST00000396345 SMIM10L2AP0DMW4 78 aa21.6■■□□□ 1.05
HOXA9-202ENST00000396345 SMIM10L2BP0DMW5 78 aa21.6■■□□□ 1.05
HOXA9-202ENST00000396345 PLCB4Q15147 1175 aa21.6■■□□□ 1.05
HOXA9-202ENST00000396345 TRPV6Q9H1D0 765 aa21.6■■□□□ 1.05
HOXA9-202ENST00000396345 DAXXQ9UER7 740 aaPredicted RBP21.6■■□□□ 1.05
HOXA9-202ENST00000396345 GTF2IRD1Q9UHL9 959 aa21.6■■□□□ 1.05
HOXA9-202ENST00000396345 MAFBQ9Y5Q3 323 aaPredicted RBP21.6■■□□□ 1.05
HOXA9-202ENST00000396345 WDR81Q562E7 1941 aa21.6■■□□□ 1.05
HOXA9-202ENST00000396345 B4GALT4O60513 344 aa21.59■■□□□ 1.05
HOXA9-202ENST00000396345 F13A1P00488 732 aa21.59■■□□□ 1.05
HOXA9-202ENST00000396345 TECP42680 631 aa21.59■■□□□ 1.05
HOXA9-202ENST00000396345 EPHA7Q15375 998 aa21.59■■□□□ 1.05
HOXA9-202ENST00000396345 TMEM266Q2M3C6 531 aa21.59■■□□□ 1.05
HOXA9-202ENST00000396345 GDF6Q6KF10 455 aaPredicted RBP21.59■■□□□ 1.05
HOXA9-202ENST00000396345 TRMT13Q9NUP7 481 aaKnown RBP21.59■■□□□ 1.05
HOXA9-202ENST00000396345 TRPC6Q9Y210 931 aa21.59■■□□□ 1.05
HOXA9-202ENST00000396345 NR2E3Q9Y5X4 410 aa21.59■■□□□ 1.05
HOXA9-202ENST00000396345 IGSF9BQ9UPX0 1349 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 POTEB3A0JP26 581 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 C17orf102A2RUQ5 167 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 BMP15O95972 392 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 CD4P01730 458 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 CLTBP09497 229 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 PRPHP41219 470 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 ATP2C1P98194 919 aaPredicted RBP21.58■■□□□ 1.05
HOXA9-202ENST00000396345 FAAP100Q0VG06 881 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 SF3A1Q15459 793 aaKnown RBP21.58■■□□□ 1.05
HOXA9-202ENST00000396345 UGCGQ16739 394 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 POTEBQ6S5H4 581 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 CKAP2LQ8IYA6 745 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 TNPO1Q92973 898 aaKnown RBP21.58■■□□□ 1.05
HOXA9-202ENST00000396345 ATP6V0A1Q93050 837 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 CEP131Q9UPN4 1083 aa21.58■■□□□ 1.05
HOXA9-202ENST00000396345 KAT6AQ92794 2004 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 POTEMA6NI47 508 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 BRD1O95696 1058 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 GNAT1P11488 350 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 ATP4AP20648 1035 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 FXR2P51116 673 aaKnown RBP eCLIP21.57■■□□□ 1.04
HOXA9-202ENST00000396345 PPFIA1Q13136 1202 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 PTGISQ16647 500 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 DTHD1Q6ZMT9 781 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 BANK1Q8NDB2 785 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 ATP8B4Q8TF62 1192 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 PRDM5Q9NQX1 630 aaPredicted RBP21.57■■□□□ 1.04
HOXA9-202ENST00000396345 PDLIM7Q9NR12 457 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 TMEM39AQ9NV64 488 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 SETD4Q9NVD3 440 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 NOD1Q9Y239 953 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 CLIC4Q9Y696 253 aa21.57■■□□□ 1.04
HOXA9-202ENST00000396345 NRCAMQ92823 1304 aa21.56■■□□□ 1.04
HOXA9-202ENST00000396345 HBP1O60381 514 aa21.56■■□□□ 1.04
HOXA9-202ENST00000396345 P4HBP07237 508 aaKnown RBP21.56■■□□□ 1.04
HOXA9-202ENST00000396345 INSRRP14616 1297 aa21.56■■□□□ 1.04
HOXA9-202ENST00000396345 PSMC5P62195 406 aa21.56■■□□□ 1.04
HOXA9-202ENST00000396345 ZNF200P98182 395 aaPredicted RBP21.56■■□□□ 1.04
HOXA9-202ENST00000396345 HIC1Q14526 733 aa21.56■■□□□ 1.04
HOXA9-202ENST00000396345 DYDC2Q96IM9 177 aa21.56■■□□□ 1.04
HOXA9-202ENST00000396345 FAM167AQ96KS9 214 aa21.56■■□□□ 1.04
HOXA9-202ENST00000396345 ZNF396Q96N95 335 aaPredicted RBP21.56■■□□□ 1.04
HOXA9-202ENST00000396345 EIF2AK1Q9BQI3 630 aaKnown RBP21.56■■□□□ 1.04
HOXA9-202ENST00000396345 FTOQ9C0B1 505 aaKnown RBP eCLIP21.56■■□□□ 1.04
HOXA9-202ENST00000396345 PRKAG2Q9UGJ0 569 aa21.56■■□□□ 1.04
HOXA9-202ENST00000396345 MYH15Q9Y2K3 1946 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 ZNF862O60290 1169 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 DKC1O60832 514 aaKnown RBP eCLIP21.55■■□□□ 1.04
HOXA9-202ENST00000396345 HOXC8P31273 242 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 QARSP47897 775 aaKnown RBP21.55■■□□□ 1.04
HOXA9-202ENST00000396345 PRKCEQ02156 737 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 CEBPZQ03701 1054 aaKnown RBP21.55■■□□□ 1.04
HOXA9-202ENST00000396345 GRIK4Q16099 956 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 IL17AQ16552 155 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 ARL6IP4Q66PJ3 421 aaKnown RBP21.55■■□□□ 1.04
HOXA9-202ENST00000396345 TRMT1LQ7Z2T5 733 aaKnown RBP21.55■■□□□ 1.04
HOXA9-202ENST00000396345 SH3RF1Q7Z6J0 888 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 BBXQ8WY36 941 aaPredicted RBP21.55■■□□□ 1.04
HOXA9-202ENST00000396345 USP28Q96RU2 1077 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 RAB34Q9BZG1 259 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 NRBP2Q9NSY0 501 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 RGL1Q9NZL6 768 aa21.55■■□□□ 1.04
HOXA9-202ENST00000396345 ZDHHC9Q9Y397 364 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms