RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CHMP4BP1P59074 171 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 SPP2Q13103 211 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 BIRC3Q13489 604 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 BRD3Q15059 726 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 CEP170P1Q96L14 293 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 KCNQ5Q9NR82 932 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 APC2O95996 2303 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 IGSF9BQ9UPX0 1349 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 CARNS1A5YM72 827 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 EYA4O95677 639 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 FDPSP14324 419 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 MAGEA1P43355 309 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 COPB1P53618 953 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 FAM186BQ8IYM0 893 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 SYN2Q92777 582 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 EPSTI1Q96J88 318 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 LAMB1P07942 1786 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 SCN9AQ15858 1988 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 PAPPAQ13219 1627 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 NAV1Q8NEY1 1877 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 MIF4GDA9UHW6 222 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 WNT10BO00744 389 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 OPA1O60313 960 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 CTDNEP1O95476 244 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 ATP5DP30049 168 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 NBPF11Q86T75 865 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 DPP9Q86TI2 863 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 SCFD2Q8WU76 684 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 GPRASP2Q96D09 838 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 DYNLL2Q96FJ2 89 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 TRMT1Q9NXH9 659 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 NOD1Q9Y239 953 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 IKBKGQ9Y6K9 419 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 COL2A1P02458 1487 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 PRELPP51888 382 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 PPFIA1Q13136 1202 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 TCP11X2Q5H9J9 407 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 PSPC1Q8WXF1 523 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 SENP7Q9BQF6 1050 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 GUCA1BQ9UMX6 200 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 VIL1P09327 827 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 MYCLP12524 364 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 IQCB1Q15051 598 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 WHAMMP3Q1A5X7 153 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 RUFY4Q6ZNE9 571 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 SLC44A5Q8NCS7 719 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF233A6NK53 670 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 AFPP02771 609 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 AKR1B1P15121 316 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 HLTFQ14527 1009 aaKnown RBP eCLIP3.7□□□□□ -1.821e-6■□□□□ 11.3
VPS13C-203ENST00000395896 KNOP1Q1ED39 458 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 APOBEC3HQ6NTF7 200 aaKnown RBP3.7□□□□□ -1.82
VPS13C-203ENST00000395896 ARMCX5Q6P1M9 558 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 MORC4Q8TE76 937 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 PAGE5Q96GU1 130 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 MED4Q9NPJ6 270 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 PLAGL2Q9UPG8 496 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 CTNND2Q9UQB3 1225 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 CASZ1Q86V15 1759 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 CYP2D7A0A087X1C5 515 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 hCG_1642624A0A1W2PR95 340 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 LGALS16A8MUM7 142 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 MAP3K9P80192 1104 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 APBA1Q02410 837 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 SPDYE2Q495Y8 402 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 TRIM72Q6ZMU5 477 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 BCL2L12Q9HB09 334 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 MAD2L2Q9UI95 211 aa3.7□□□□□ -1.82
VPS13C-203ENST00000395896 LRRC10BA6NIK2 292 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ASAP2O43150 1006 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 IVLP07476 585 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MXI1P50539 228 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 DDR1Q08345 913 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MAPK6Q16659 721 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 GLE1Q53GS7 698 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ACCSQ96QU6 501 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 FBXO2Q9UK22 296 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 DIS3Q9Y2L1 958 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 CCDC188H7C350 402 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 TNNI1P19237 187 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 YARSP54577 528 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 HDXQ7Z353 690 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 LDHDQ86WU2 507 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF277Q9NRM2 450 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 WNK3Q9BYP7 1800 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 CDK17Q00537 523 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SHC4Q6S5L8 630 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 BTNL9Q6UXG8 535 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SREK1Q8WXA9 508 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 JMJD4Q9H9V9 463 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 LZTFL1Q9NQ48 299 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 CLRN2A0PK11 232 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 CLDN3O15551 220 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MAPTP10636 758 aaKnown RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 MFAP3P55082 362 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 GABPAQ06546 454 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 SNAPC2Q13487 334 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 ERGIC2Q96RQ1 377 aa3.69□□□□□ -1.82
VPS13C-203ENST00000395896 FAM207AQ9NSI2 230 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-203ENST00000395896 K7ENM7 598 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms