RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CEP55Q53EZ4 464 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 BLOC1S2Q6QNY1 142 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 RPAINQ86UA6 219 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 SP7Q8TDD2 431 aaPredicted RBP20.6■□□□□ 0.89
CXCL12-204ENST00000395793 CRYGNQ8WXF5 182 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 GLG1Q92896 1179 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 SMARCAD1Q9H4L7 1026 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 SUGCTQ9HAC7 445 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 AGO4Q9HCK5 861 aaKnown RBP20.6■□□□□ 0.89
CXCL12-204ENST00000395793 TUBE1Q9UJT0 475 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 COL4A6Q14031 1691 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 BRWD1Q9NSI6 2320 aa20.59■□□□□ 0.89
CXCL12-204ENST00000395793 MEIS1O00470 390 aa20.59■□□□□ 0.89
CXCL12-204ENST00000395793 SCG2P13521 617 aa20.59■□□□□ 0.89
CXCL12-204ENST00000395793 RPS6KB1P23443 525 aa20.59■□□□□ 0.89
CXCL12-204ENST00000395793 ACTR2P61160 394 aa20.59■□□□□ 0.89
CXCL12-204ENST00000395793 JAKMIP3Q5VZ66 844 aa20.59■□□□□ 0.89
CXCL12-204ENST00000395793 TEX2Q8IWB9 1127 aa20.59■□□□□ 0.89
CXCL12-204ENST00000395793 TGS1Q96RS0 853 aaKnown RBP20.59■□□□□ 0.89
CXCL12-204ENST00000395793 C17orf80Q9BSJ5 609 aa20.59■□□□□ 0.89
CXCL12-204ENST00000395793 FAM86B1E9PN63 330 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 PPFIA3O75145 1194 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 FAM86B2P0C5J1 330 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 GHRP10912 638 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 INSRRP14616 1297 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 IGBP1P78318 339 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 FGD1P98174 961 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 NTRK3Q16288 839 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 TAF2Q6P1X5 1199 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 FBXL16Q8N461 479 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 TRAPPC12Q8WVT3 735 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 DNAJB3Q8WWF6 145 aa20.58■□□□□ 0.89
CXCL12-204ENST00000395793 IFIH1Q9BYX4 1025 aaKnown RBP20.58■□□□□ 0.89
CXCL12-204ENST00000395793 ATG2AQ2TAZ0 1938 aa20.58■□□□□ 0.88
CXCL12-204ENST00000395793 WDR81Q562E7 1941 aa20.58■□□□□ 0.88
CXCL12-204ENST00000395793 IGLV3-22A0A075B6J6 115 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 ESYT2A0FGR8 921 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 CCNE2O96020 404 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 LPIN1Q14693 890 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 PLCB4Q15147 1175 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 SKIV2LQ15477 1246 aaKnown RBP20.57■□□□□ 0.88
CXCL12-204ENST00000395793 RALGAPA2Q2PPJ7 1873 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 ADAMTS19Q8TE59 1207 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 PHKBQ93100 1093 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 TOP1MTQ969P6 601 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 SDF4Q9BRK5 362 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 INSL6Q9Y581 213 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 NCOR1O75376 2440 aa20.57■□□□□ 0.88
CXCL12-204ENST00000395793 DDX39AO00148 427 aaKnown RBP20.56■□□□□ 0.88
CXCL12-204ENST00000395793 UPP2O95045 317 aa20.56■□□□□ 0.88
CXCL12-204ENST00000395793 ATG7O95352 703 aa20.56■□□□□ 0.88
CXCL12-204ENST00000395793 KCNQ1P51787 676 aa20.56■□□□□ 0.88
CXCL12-204ENST00000395793 APBB2Q92870 758 aa20.56■□□□□ 0.88
CXCL12-204ENST00000395793 UIMC1Q96RL1 719 aa20.56■□□□□ 0.88
CXCL12-204ENST00000395793 ZMYND12Q9H0C1 365 aa20.56■□□□□ 0.88
CXCL12-204ENST00000395793 CDY2AQ9Y6F7 541 aa20.56■□□□□ 0.88
CXCL12-204ENST00000395793 MUC3AQ02505 3323 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 TTC3P53804 2025 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 CCDC196A0A1B0GTZ2 297 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 DHX15O43143 795 aaKnown RBP20.55■□□□□ 0.88
CXCL12-204ENST00000395793 PRPF3O43395 683 aaKnown RBP20.55■□□□□ 0.88
CXCL12-204ENST00000395793 FBXO47Q5MNV8 452 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 NIPA1Q7RTP0 329 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 PLA2G4DQ86XP0 818 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 RASGRP4Q8TDF6 673 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 NECAB3Q96P71 396 aaPredicted RBP20.55■□□□□ 0.88
CXCL12-204ENST00000395793 GLT8D2Q9H1C3 349 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 TSPYL2Q9H2G4 693 aaPredicted RBP20.55■□□□□ 0.88
CXCL12-204ENST00000395793 NCOA5Q9HCD5 579 aaKnown RBP20.55■□□□□ 0.88
CXCL12-204ENST00000395793 TRPC6Q9Y210 931 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 XIRP2A4UGR9 3374 aa20.55■□□□□ 0.88
CXCL12-204ENST00000395793 IGKV6D-21A0A0A0MT36 114 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 REC8O95072 547 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 CYP3A4P08684 503 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 BMP1P13497 986 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 ZNF76P36508 570 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 STAT5BP51692 787 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 MRPS6P82932 125 aaKnown RBP20.54■□□□□ 0.88
CXCL12-204ENST00000395793 PLPPR4Q7Z2D5 763 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 FAM49AQ9H0Q0 323 aaPredicted RBP20.54■□□□□ 0.88
CXCL12-204ENST00000395793 AZI2Q9H6S1 392 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 AGO3Q9H9G7 860 aaKnown RBP20.54■□□□□ 0.88
CXCL12-204ENST00000395793 EVPLQ92817 2033 aa20.54■□□□□ 0.88
CXCL12-204ENST00000395793 MYH9P35579 1960 aaKnown RBP20.54■□□□□ 0.88
CXCL12-204ENST00000395793 RRN3P2A6NIE6 340 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 TNFRSF10AO00220 468 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 EDIL3O43854 480 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 PDIA3P30101 505 aaKnown RBP20.53■□□□□ 0.88
CXCL12-204ENST00000395793 EVCP57679 992 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 TOB2Q14106 344 aaPredicted RBP20.53■□□□□ 0.88
CXCL12-204ENST00000395793 ABHD15Q6UXT9 468 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 CCDC60Q8IWA6 550 aaPredicted RBP20.53■□□□□ 0.88
CXCL12-204ENST00000395793 REXO1Q8N1G1 1221 aaKnown RBP20.53■□□□□ 0.88
CXCL12-204ENST00000395793 FBXO22Q8NEZ5 403 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 LINC01599Q8WXQ3 324 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 UHRF1Q96T88 793 aaPredicted RBP20.53■□□□□ 0.88
CXCL12-204ENST00000395793 YME1L1Q96TA2 773 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 LMCD1Q9NZU5 365 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 KIAA1671Q9BY89 1806 aa20.53■□□□□ 0.88
CXCL12-204ENST00000395793 CCT2P78371 535 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms